| heatmapCombinations {chromstaR} | R Documentation |
Plot a heatmap that shows the binary presence/absence of marks for the different combinations.
heatmapCombinations(model = NULL, marks = NULL, emissionProbs = NULL)
model |
A |
marks |
A character vector with histone marks. If specified, |
emissionProbs |
A matrix with emission probabilities where |
A ggplot object.
Aaron Taudt
marks <- c('H3K4me3','H3K27me3','H4K20me1')
heatmapCombinations(marks=marks)
file <- system.file("data","multivariate_mode-combinatorial_condition-SHR.RData",
package="chromstaR")
heatmapCombinations(file)