Documentation

News and updates

• BioC 3.1: NEWS of my BioC packages
• BioC 3.2: NEWS of my BioC packages
• BioC 3.3: NEWS of my BioC packages
• BioC 3.4: NEWS of my BioC packages
• parsing BED coordinates
• ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization

Annotation

• ChIPseeker for ChIP peak annotation
• multiple annotation in ChIPseeker

Visualization

• visualization methods in ChIPseeker
• upsetplot in ChIPseeker
• covplot supports GRangesList

Functional Enrichment Analysis

• functional enrichment analysis with NGS data

Comparison

• ChIPseq data mining with ChIPseeker

Find out more on https://guangchuangyu.github.io/tags/chipseeker/.