Nucleic Acids
Nucleic Acids
Macromolecules that store information and provide
the instructions for building proteins
Polymers made from monomers called nucleotides
Two types
Deoxyribonucleic acid (DNA)
Ribonucleic acid (RNA)
3 Parts of a Nucleotide
Phosphate (PO4
3-) Group
connected to 5-carbon in the sugar
link together to form chains
Pentose Sugar
deoxyribose in DNA
ribose in RNA
Nitrogenous Bases
purines (Adenine (A) and Guanine (G))
pyrimidines (Cytosine (C), Thymine (T) and Uracil (U)
3 Parts of a Nucleotide
3 Parts of a Nucleotide
Arrangement of Nucleotides
Deoxyribonucleic Acid (DNA)
Structure and Function
Who discovered DNA?
James Watson and Francis Crick
accurately described the structure of DNA
Who discovered DNA?
3D Model of DNA
they used
cardboard and wire
to build their model
Watson, Crick and Wilkins
James Watson, Francis Crick and Maurice WIlkins
received the Nobel Prize in Physiology or Medicine 1962
for their discoveries concerning the molecular structure of
nucleic acids and its significance for information transfer
in living material
Dna synthesis and protein synthesis
Who discovered DNA?
Rosalind Franklin
worked at King’s College
in London as a technician
doing X-ray
crystallography
she improved the
resolution of the cameras
used in order to obtain the
most detailed images yet
of X-ray diffraction of DNA
Who discovered DNA?
X-ray diffraction of DNA
detailed image of DNA
that allow Rosalind
Franklin to make very
exact measurements
related to the structure
of DNA
Who discovered DNA?
Raymond Gosling
made the X-ray
diffraction image of DNA
known as Photograph 51
Who discovered DNA?
Maurice Wilkins
worked with Rosalind
Franklin and Raymond
Gosling to produce images
of DNA
also contributed to the
discovery of the structure of
DNA
Deoxyribonucleic Acid (DNA)
located at the nuclei of eukaryotic cell and nucleoid
in prokaryotes
Deoxyribonucleic Acid (DNA)
Structure : Double-
stranded molecule with
a long chain of
nucleotides
Sugar : Deoxyribose
Nitrogen Bases :
Adenine and
Thymine
Guanine and
Cytosine
Deoxyribonucleic Acid (DNA)
Function : contains the genetic instructions used in the
development and functioning of all known living organisms
Stability :
deoxyribose sugar in DNA is less reactive because of
C-H bonds
stable in alkaline conditions
DNA has smaller grooves where the damaging enzyme
can attach which makes it harder for the enzymes to
attack DNA
Ribonucleic Acid (RNA)
Structure and Function
Who discovered RNA?
The discovery of RNA
began with the discovery of
nucleic acids by Friedrich
Miescher
Ribonucleic Acid (RNA)
Location : nucleus,
cytoplasm, endoplasmic
reticulum, mitochondria,
and chloroplast
Structure : single-stranded
molecule in most of its
biological roles and has a
shorter chain of nucleotides
Sugar : ribose
Ribonucleic Acid (RNA)
Nitrogenous Bases :
Guanine and Cytosine
Adenine and Uracil
Function : involved in
protein synthesis and
sometimes in the
transmission of genetic
information
Ribonucleic Acid (RNA)
Stability :
ribose sugar is more reactive because of C-OH
(hydroxyl) bonds
not stable in alkaline conditions
has larger grooves which make it easier to be
attacked by enzymes
Ribonucleic Acid (RNA)
3 Types of RNA
messenger RNA (mRNA)
transfer RNA (tRNA)
ribosomal RNA (rRNA)
messenger RNA (mRNA)
carries information from DNA to the ribosome sites
of protein synthesis in the cell
Who discovered mRNA?
Sydney Brenner, Francis Crick, Francois Jacob and
Jacques Monod discovered the messenger RNA
transfer RNA (tRNA)
small RNA chain of about
74-93 nucleotides that
carries amino acids to
the location of protein
synthesis
Who discovered tRNA?
Mahlon Hoagland and Paul Zamenick discovered
tRNA
ribosomal RNA (rRNA)
component of ribosomes, the protein synthetic
factories in the cell
ribosomal RNA (rRNA)
Eukaryotes : 60S LRS and 40S SRS = 80S
Prokaryotes : 50S LRS and 30S SRS = 70S
Who discovered ribosome?
George E. Palade discovered
ribosomes and described
them as small particles in the
cytoplasm that preferentially
associated with the
endoplasmic reticulum
membrane.
DNA Replication
What is DNA Replication?
Also known as DNA Synthesis
It is the process by which DNA makes a copy of itself during cell
division
3 Major Steps in DNA Replication
Initiation
Proteins bind to the origin of replication while helicase unwinds the
DNA helix and two replication forks are formed at the origin of
replication
Elongation
A primer sequence is added with complementary RNA nucleotides,
which are then replaced by DNA nucleotides
Termination
Involves interaction between two components, (1) a termination site
sequence in the DNA and (2) a protein which binds to this sequence
to physically stop DNA replication
DNA Replication
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
DNA Helicase unwinds the
DNA
Single-stranded DNA-binding
protein (SSB), binds to single-
stranded region of DNA to keep
the strands separated by holding
them in place so that each strand
can serve as a template for new
DNA synthesis.
Replication fork is very active
where DNA replication takes
place
Leading Strand
Lagging Strand
Primase is an enzyme that
synthesizes short RNA sequences
called primers
Primase adds RNA bases in several places
along the growing strand, enabling DNA
polymerase to add DNA nucleotides between
them
Dna synthesis and protein synthesis
Primers serve as a starting point for DNA synth
Assembles a new strand of DNA
based on the template of RNA
primer
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
A strand of DNA being
replicated continuously. This
strand is made in the 5’ to 3’
direction by continuous
polymerization at the 3’ growing
tip.
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Requires a slight delay before undergoing replication,
and it must undergo replication discontinuously in small
fragments
Relatively short sequences of DNA nucleotides
which are synthesized on the lagging strand during
DNA replication.
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
An enzyme which
removes successive
nucleotides from the end
of a polynucleotide
molecule
Dna synthesis and protein synthesis
An enzyme that facilitates the
joining of DNA strands together by
catalyzing the formation of a
phosphodiester bond
Dna synthesis and protein synthesis
Semi-conservative replication
Original DNA strand
Original DNA strand
New DNA strand
New DNA strand
Central Dogma
DNA RNA Proteins
Central Dogma
The central dogma of
molecular biology describes
the two-step process,
transcription and translation,
by which the information in
genes flows into proteins
6 Major Steps in Protein Synthesis
Transcription
RNA is made on a DNA
template
RNA Processing
RNA transcript is spliced and
modified to produce mRNA
Amino Acid (AA) Attachment
tRNA molecules pick up their
AA
Initiation of Translation
First tRNA combines with the mRNA
and ribosomal subunits to start
polypeptide synthesis
Elongation
Polypeptide elongates as AA are
added
Terminations
A stop codon signals release of the
completed polypeptide and
separation of ribosomal units
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
The first step of gene expression, in
which particular segment of DNA is
copied into RNA (especially mRNA)
by the enzyme RNA polymerase
The process in which ribosomes in
the cytoplasm or ER synthesize
proteins after the process of DNA to
RNA
Messenger RNA (mRNA) is
decoded in a ribosome to produce a
specific amino acid chain or
polypeptide
Dna synthesis and protein synthesis
An enzyme that is responsible for copying
a DNA sequence into an RNA sequence
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
DNA sequences that define where transcription of a gene by RNA polymerase
begins
Promoter sequences are typically located directly
upstream or at the 5’ end of the transcription initiation
site
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
mRNA convey genetic information from DNA to the ribosome, where
they specify the amino acid sequence of the protein products of gene
expression
A transcription terminator is a section of
nucleic acid sequence that marks the
end of a gene or operon in genomic DNA
Dna synthesis and protein synthesis
Precursor messenger RNA (pre-mRNA)
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
5’ cap
3’ poly-A tail
Poly-A tail is a long chain of adenine nucleotides that is
added to a messenger RNA molecule during RNA
processing to increase the stability of the molecule
It protects the mRNA molecule from enzymatic degradation
in the cytoplasm and aids in transcription termination,
export of the mRNA from the nucleus and translation
Dna synthesis and protein synthesis
Large and complex molecular
machine found primarily within the
nucleus
Removes introns from a transcribed pre-mRNA
Dna synthesis and protein synthesis
Mature messenger RNA (mRNA)
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
A codon is a sequence of three DNA or RNA nucleotides that
corresponds with a specific amino acid or stop signal during
protein synthesis
Dna synthesis and protein synthesis
A start codon or initiation codon is the first codon
of a messenger RNA transcript translated by a
ribosome
Always codes for methionine in eukaryotes
Often preceded by 5’ untranslated region (5’ UTR)
A stop codon or termination codon is a nucleotide triplet
within mRNA that signals a termination of translation into
proteins
Eukaryotic initiation factors (eIFs) are proteins or protein
complexes involved in the initiation phase of eukaryotic
translation
These proteins help stabilize the formation of ribosomal pre-initiation complexes
around the start codon and are an important input for post-transcription gene
regulation
Initiating amino acid is methionine rather than N-
formylmethionine
A special methionine tRNA that
binds to the initiation codon AUG
that forms part of the initiation
complex at the start of mRNA
translation
The anticodon region of a transfer RNA, a sequence of
three bases that are complementary to a codon in the
messenger RNA
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Binds to the initiation complex,
which causes the release of
initiation factors
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Aminoacyl-tRNA (aa-tRNA
or charged tRNA) , along
with some elongation
factors, deliver the amino
acid to the ribosome for
incorporation into the
polypeptide chain that is
being produced
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
A release factor is a
protein that allows
for the termination
of translation by
recognising the
termination codon or
stop codon in an
mRNA sequence
Chain of amino
acid, linked
covalently by
peptide bonds
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
Dna synthesis and protein synthesis
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Dna synthesis and protein synthesis

  • 2. Nucleic Acids Macromolecules that store information and provide the instructions for building proteins Polymers made from monomers called nucleotides Two types Deoxyribonucleic acid (DNA) Ribonucleic acid (RNA)
  • 3. 3 Parts of a Nucleotide Phosphate (PO4 3-) Group connected to 5-carbon in the sugar link together to form chains Pentose Sugar deoxyribose in DNA ribose in RNA Nitrogenous Bases purines (Adenine (A) and Guanine (G)) pyrimidines (Cytosine (C), Thymine (T) and Uracil (U)
  • 4. 3 Parts of a Nucleotide
  • 5. 3 Parts of a Nucleotide
  • 8. Who discovered DNA? James Watson and Francis Crick accurately described the structure of DNA
  • 9. Who discovered DNA? 3D Model of DNA they used cardboard and wire to build their model
  • 10. Watson, Crick and Wilkins James Watson, Francis Crick and Maurice WIlkins received the Nobel Prize in Physiology or Medicine 1962 for their discoveries concerning the molecular structure of nucleic acids and its significance for information transfer in living material
  • 12. Who discovered DNA? Rosalind Franklin worked at King’s College in London as a technician doing X-ray crystallography she improved the resolution of the cameras used in order to obtain the most detailed images yet of X-ray diffraction of DNA
  • 13. Who discovered DNA? X-ray diffraction of DNA detailed image of DNA that allow Rosalind Franklin to make very exact measurements related to the structure of DNA
  • 14. Who discovered DNA? Raymond Gosling made the X-ray diffraction image of DNA known as Photograph 51
  • 15. Who discovered DNA? Maurice Wilkins worked with Rosalind Franklin and Raymond Gosling to produce images of DNA also contributed to the discovery of the structure of DNA
  • 16. Deoxyribonucleic Acid (DNA) located at the nuclei of eukaryotic cell and nucleoid in prokaryotes
  • 17. Deoxyribonucleic Acid (DNA) Structure : Double- stranded molecule with a long chain of nucleotides Sugar : Deoxyribose Nitrogen Bases : Adenine and Thymine Guanine and Cytosine
  • 18. Deoxyribonucleic Acid (DNA) Function : contains the genetic instructions used in the development and functioning of all known living organisms Stability : deoxyribose sugar in DNA is less reactive because of C-H bonds stable in alkaline conditions DNA has smaller grooves where the damaging enzyme can attach which makes it harder for the enzymes to attack DNA
  • 20. Who discovered RNA? The discovery of RNA began with the discovery of nucleic acids by Friedrich Miescher
  • 21. Ribonucleic Acid (RNA) Location : nucleus, cytoplasm, endoplasmic reticulum, mitochondria, and chloroplast Structure : single-stranded molecule in most of its biological roles and has a shorter chain of nucleotides Sugar : ribose
  • 22. Ribonucleic Acid (RNA) Nitrogenous Bases : Guanine and Cytosine Adenine and Uracil Function : involved in protein synthesis and sometimes in the transmission of genetic information
  • 23. Ribonucleic Acid (RNA) Stability : ribose sugar is more reactive because of C-OH (hydroxyl) bonds not stable in alkaline conditions has larger grooves which make it easier to be attacked by enzymes
  • 24. Ribonucleic Acid (RNA) 3 Types of RNA messenger RNA (mRNA) transfer RNA (tRNA) ribosomal RNA (rRNA)
  • 25. messenger RNA (mRNA) carries information from DNA to the ribosome sites of protein synthesis in the cell
  • 26. Who discovered mRNA? Sydney Brenner, Francis Crick, Francois Jacob and Jacques Monod discovered the messenger RNA
  • 27. transfer RNA (tRNA) small RNA chain of about 74-93 nucleotides that carries amino acids to the location of protein synthesis
  • 28. Who discovered tRNA? Mahlon Hoagland and Paul Zamenick discovered tRNA
  • 29. ribosomal RNA (rRNA) component of ribosomes, the protein synthetic factories in the cell
  • 30. ribosomal RNA (rRNA) Eukaryotes : 60S LRS and 40S SRS = 80S Prokaryotes : 50S LRS and 30S SRS = 70S
  • 31. Who discovered ribosome? George E. Palade discovered ribosomes and described them as small particles in the cytoplasm that preferentially associated with the endoplasmic reticulum membrane.
  • 33. What is DNA Replication? Also known as DNA Synthesis It is the process by which DNA makes a copy of itself during cell division
  • 34. 3 Major Steps in DNA Replication Initiation Proteins bind to the origin of replication while helicase unwinds the DNA helix and two replication forks are formed at the origin of replication Elongation A primer sequence is added with complementary RNA nucleotides, which are then replaced by DNA nucleotides Termination Involves interaction between two components, (1) a termination site sequence in the DNA and (2) a protein which binds to this sequence to physically stop DNA replication
  • 46. DNA Helicase unwinds the DNA Single-stranded DNA-binding protein (SSB), binds to single- stranded region of DNA to keep the strands separated by holding them in place so that each strand can serve as a template for new DNA synthesis.
  • 47. Replication fork is very active where DNA replication takes place Leading Strand Lagging Strand
  • 48. Primase is an enzyme that synthesizes short RNA sequences called primers
  • 49. Primase adds RNA bases in several places along the growing strand, enabling DNA polymerase to add DNA nucleotides between them
  • 51. Primers serve as a starting point for DNA synth
  • 52. Assembles a new strand of DNA based on the template of RNA primer
  • 56. A strand of DNA being replicated continuously. This strand is made in the 5’ to 3’ direction by continuous polymerization at the 3’ growing tip.
  • 59. Requires a slight delay before undergoing replication, and it must undergo replication discontinuously in small fragments
  • 60. Relatively short sequences of DNA nucleotides which are synthesized on the lagging strand during DNA replication.
  • 70. An enzyme which removes successive nucleotides from the end of a polynucleotide molecule
  • 72. An enzyme that facilitates the joining of DNA strands together by catalyzing the formation of a phosphodiester bond
  • 76. New DNA strand New DNA strand
  • 78. Central Dogma The central dogma of molecular biology describes the two-step process, transcription and translation, by which the information in genes flows into proteins
  • 79. 6 Major Steps in Protein Synthesis Transcription RNA is made on a DNA template RNA Processing RNA transcript is spliced and modified to produce mRNA Amino Acid (AA) Attachment tRNA molecules pick up their AA Initiation of Translation First tRNA combines with the mRNA and ribosomal subunits to start polypeptide synthesis Elongation Polypeptide elongates as AA are added Terminations A stop codon signals release of the completed polypeptide and separation of ribosomal units
  • 86. The first step of gene expression, in which particular segment of DNA is copied into RNA (especially mRNA) by the enzyme RNA polymerase
  • 87. The process in which ribosomes in the cytoplasm or ER synthesize proteins after the process of DNA to RNA Messenger RNA (mRNA) is decoded in a ribosome to produce a specific amino acid chain or polypeptide
  • 89. An enzyme that is responsible for copying a DNA sequence into an RNA sequence
  • 93. DNA sequences that define where transcription of a gene by RNA polymerase begins Promoter sequences are typically located directly upstream or at the 5’ end of the transcription initiation site
  • 97. mRNA convey genetic information from DNA to the ribosome, where they specify the amino acid sequence of the protein products of gene expression
  • 98. A transcription terminator is a section of nucleic acid sequence that marks the end of a gene or operon in genomic DNA
  • 100. Precursor messenger RNA (pre-mRNA)
  • 104. 3’ poly-A tail Poly-A tail is a long chain of adenine nucleotides that is added to a messenger RNA molecule during RNA processing to increase the stability of the molecule It protects the mRNA molecule from enzymatic degradation in the cytoplasm and aids in transcription termination, export of the mRNA from the nucleus and translation
  • 106. Large and complex molecular machine found primarily within the nucleus Removes introns from a transcribed pre-mRNA
  • 112. A codon is a sequence of three DNA or RNA nucleotides that corresponds with a specific amino acid or stop signal during protein synthesis
  • 114. A start codon or initiation codon is the first codon of a messenger RNA transcript translated by a ribosome Always codes for methionine in eukaryotes Often preceded by 5’ untranslated region (5’ UTR)
  • 115. A stop codon or termination codon is a nucleotide triplet within mRNA that signals a termination of translation into proteins
  • 116. Eukaryotic initiation factors (eIFs) are proteins or protein complexes involved in the initiation phase of eukaryotic translation These proteins help stabilize the formation of ribosomal pre-initiation complexes around the start codon and are an important input for post-transcription gene regulation
  • 117. Initiating amino acid is methionine rather than N- formylmethionine
  • 118. A special methionine tRNA that binds to the initiation codon AUG that forms part of the initiation complex at the start of mRNA translation
  • 119. The anticodon region of a transfer RNA, a sequence of three bases that are complementary to a codon in the messenger RNA
  • 122. Binds to the initiation complex, which causes the release of initiation factors
  • 128. Aminoacyl-tRNA (aa-tRNA or charged tRNA) , along with some elongation factors, deliver the amino acid to the ribosome for incorporation into the polypeptide chain that is being produced
  • 144. A release factor is a protein that allows for the termination of translation by recognising the termination codon or stop codon in an mRNA sequence
  • 145. Chain of amino acid, linked covalently by peptide bonds