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Foundations in
Microbiology
Seventh Edition
Chapter 1
The Main Themes of
Microbiology
Lecture PowerPoint to accompany
Talaro
Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display.
2
1.1 Microbiology
• The study of organisms too small to be seen
without magnification
• Microorganisms include:
– Bacteria
– Viruses
– Fungi
– Protozoa
– Helminths (worms)
– Algae
3
Microbiological Endeavors Table 1.1
• Immunology
• Public health microbiology and epidemiology
• Food, dairy, and aquatic microbiology
• Agricultural Microbiology
• Biotechnology
• Genetic Engineering and Recombinant DNA
Technology
4
1.2 Origins of Microorganisms
• Bacteria-like organisms have existed on earth for about 3.5
billion years
– Prokaryotes (pre-nucleus): Simple cells
– Eukaryotes (true nucleus): Complex cells
5
Microbial Involvement in Energy
and Nutrient Flow
• The flow of energy and food through the
earth’s ecosystems
– Photosynthesis: Light fueled conversion of
carbon dioxide to organic material
– Decomposition: Breakdown of dead matter and
wastes into simple compounds
6
1.3 Human Uses of Microorganisms
• Biotechnology
– Production of foods, drugs, and vaccines
• Genetic engineering
– Recombinant DNA
• Bioremediation
Microbes at Work
7
8
1.4 Infectious Diseases
• Pathogens: Microorganisms that do harm
• Nearly 2,000 different microbes cause diseases
• 10 B new infections/year worldwide
• 12 M deaths from infections/year worldwide
9
10
Figure 1.4
Worldwide infectious
disease statistics
11
1.5 Characteristics of Microbes
• Two cell lines
– Prokaryote – microscopic, unicellular organisms,
lack nuclei and membrane-bound organelles
– Eukaryote – unicellular (microscopic) and
multicellular, nucleus and membrane-bound
organelles
• Viruses
– Acellular, parasitic particles composed of a
nucleic acid and protein
Figure 1.5 Basic structure of cells and
viruses
12
Figure 1.6 The six types of microorganisms
13
Microbial Dimensions
14
Lifestyles of Microorganisms
• Majority live a free existence, are relatively
harmless and often beneficial
• Many microorganisms have close associations
with other organisms
– Parasites
– Hosts
15
16
1.6 Historical Foundations of
Microbiology
• Thousands of microbiologists, 300 years
• Prominent discoveries include:
– Microscopy
– Scientific method
– Development of medical microbiology
– Microbiology techniques
Spontaneous Generation
Early belief that some forms of life could arise
from vital forces present in nonliving or
decomposing matter (flies from manure, etc.)
18
Antoni van Leeuwenhoek (1632-1723)
• Dutch linen merchant
• First to observe living
microbes
• Single-lens magnified
up to 300X
Insert figure 1.8
19
Insert figure 1.9 (a)
microscope
20
Scientific Method
• Approach taken by scientists to explain a certain
natural phenomenon
• Form a hypothesis - a tentative explanation that
can be supported or refuted
– Deductive approach “If…, then….”
• A lengthy process of experimentation, analysis,
and testing either supports or refutes the
hypothesis
21
• Results must be published and repeated by
other investigators.
• If hypothesis is supported by a growing body
of evidence and survives rigorous scrutiny, it
moves to the next level of confidence - it
becomes a theory.
• If evidence of a theory is so compelling that
the next level of confidence is reached, it
becomes a Law or principle.
The Development of Medical
Microbiology
• Early experiments led to the realization that
microbes are everywhere
• This discovery led to immediate applications
in medicine
– Germ theory of disease: resulted in the use of
sterile, aseptic, and pure culture techniques
22
23
Discovery of Spores and Sterilization
• John Tyndall and Ferdinand Cohn each
demonstrated the presence of heat resistant
forms of some microbes.
– Cohn determined these forms to be heat-
resistant bacterial endospores.
• Sterility requires the elimination of all life
forms including endospores and viruses.
Figure 1.10 The pattern of
deductive reasoning
24
25
Development of Aseptic Techniques
• The human body is a source of infection
– Dr. Oliver Wendell Holmes – observed that
mothers of home births had fewer infections
than those who gave birth in hospitals
– Dr. Ignaz Semmelweis – correlated infections
with physicians coming directly from autopsy
room to maternity ward
26
• Joseph Lister – introduced aseptic
techniques reducing microbes in medical
settings and preventing wound infections
– Involved disinfection of hands using chemicals
prior to surgery
– Use of heat for sterilization
27
Pathogens and Germ Theory of
Disease
• Many diseases are caused by the growth of
microbes in the body and not by sins, bad
character, or poverty, etc.
• Two major contributors:
Louis Pasteur and Robert Koch
28
Louis Pasteur (1822-1895)
• Showed microbes caused
fermentation and spoilage
• Disproved spontaneous
generation of microorganisms
• Developed pasteurization
• Demonstrated what is now
known as Germ Theory of
Disease
Insert figure 1.11
29
Robert Koch (1843-1910)
• Established Koch’s
postulates - a sequence of
experimental steps that verified the
germ theory
• Identified cause of anthrax,
TB, and cholera
• Developed pure culture
methods
Insert figure 1.12
1.7 Taxonomy
• Taxonomy: organizing, classifying, and naming
living things
– Formal system originated by Carl von Linné
• Concerned with:
– Classification – orderly arrangement of organisms into
groups
– Nomenclature – assigning names
– Identification – determining and recording traits of
organisms for placement into taxonomic schemes
30
31
Levels of Classification
• Domain - Archaea, Bacteria, & Eukarya
• Kingdom
• Phylum or Division
• Class
• Order
• Family
• Genus
• Species
Figure 1.13 Sample taxonomy
32
33
Assigning Specific Names
• Binomial (scientific) nomenclature
• Gives each microbe 2 names:
– Genus - capitalized
– species - lowercase
• Both italicized or underlined
– Staphylococcus aureus (S. aureus)
• Inspiration for names is extremely varied and
often imaginative
34
The Origin and Evolution of
Microorganisms
• Phylogeny: natural relatedness between groups of
organisms
• Evolution
– All new species originate from preexisting species
– Closely related organism have similar features because they
evolved from common ancestral forms
• Evolution usually progresses toward greater
complexity
35
3 Domains
• Bacteria - true bacteria
• Archaea - odd bacteria that live in extreme
environments, high salt, heat, etc.
• Eukarya - have a nucleus and organelles
36

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Foundations in Microbiology chapt01_lecture

  • 1. Foundations in Microbiology Seventh Edition Chapter 1 The Main Themes of Microbiology Lecture PowerPoint to accompany Talaro Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display.
  • 2. 2 1.1 Microbiology • The study of organisms too small to be seen without magnification • Microorganisms include: – Bacteria – Viruses – Fungi – Protozoa – Helminths (worms) – Algae
  • 3. 3 Microbiological Endeavors Table 1.1 • Immunology • Public health microbiology and epidemiology • Food, dairy, and aquatic microbiology • Agricultural Microbiology • Biotechnology • Genetic Engineering and Recombinant DNA Technology
  • 4. 4 1.2 Origins of Microorganisms • Bacteria-like organisms have existed on earth for about 3.5 billion years – Prokaryotes (pre-nucleus): Simple cells – Eukaryotes (true nucleus): Complex cells
  • 5. 5 Microbial Involvement in Energy and Nutrient Flow • The flow of energy and food through the earth’s ecosystems – Photosynthesis: Light fueled conversion of carbon dioxide to organic material – Decomposition: Breakdown of dead matter and wastes into simple compounds
  • 6. 6 1.3 Human Uses of Microorganisms • Biotechnology – Production of foods, drugs, and vaccines • Genetic engineering – Recombinant DNA • Bioremediation
  • 8. 8 1.4 Infectious Diseases • Pathogens: Microorganisms that do harm • Nearly 2,000 different microbes cause diseases • 10 B new infections/year worldwide • 12 M deaths from infections/year worldwide
  • 9. 9
  • 11. 11 1.5 Characteristics of Microbes • Two cell lines – Prokaryote – microscopic, unicellular organisms, lack nuclei and membrane-bound organelles – Eukaryote – unicellular (microscopic) and multicellular, nucleus and membrane-bound organelles • Viruses – Acellular, parasitic particles composed of a nucleic acid and protein
  • 12. Figure 1.5 Basic structure of cells and viruses 12
  • 13. Figure 1.6 The six types of microorganisms 13
  • 15. Lifestyles of Microorganisms • Majority live a free existence, are relatively harmless and often beneficial • Many microorganisms have close associations with other organisms – Parasites – Hosts 15
  • 16. 16 1.6 Historical Foundations of Microbiology • Thousands of microbiologists, 300 years • Prominent discoveries include: – Microscopy – Scientific method – Development of medical microbiology – Microbiology techniques
  • 17. Spontaneous Generation Early belief that some forms of life could arise from vital forces present in nonliving or decomposing matter (flies from manure, etc.)
  • 18. 18 Antoni van Leeuwenhoek (1632-1723) • Dutch linen merchant • First to observe living microbes • Single-lens magnified up to 300X Insert figure 1.8
  • 19. 19 Insert figure 1.9 (a) microscope
  • 20. 20 Scientific Method • Approach taken by scientists to explain a certain natural phenomenon • Form a hypothesis - a tentative explanation that can be supported or refuted – Deductive approach “If…, then….” • A lengthy process of experimentation, analysis, and testing either supports or refutes the hypothesis
  • 21. 21 • Results must be published and repeated by other investigators. • If hypothesis is supported by a growing body of evidence and survives rigorous scrutiny, it moves to the next level of confidence - it becomes a theory. • If evidence of a theory is so compelling that the next level of confidence is reached, it becomes a Law or principle.
  • 22. The Development of Medical Microbiology • Early experiments led to the realization that microbes are everywhere • This discovery led to immediate applications in medicine – Germ theory of disease: resulted in the use of sterile, aseptic, and pure culture techniques 22
  • 23. 23 Discovery of Spores and Sterilization • John Tyndall and Ferdinand Cohn each demonstrated the presence of heat resistant forms of some microbes. – Cohn determined these forms to be heat- resistant bacterial endospores. • Sterility requires the elimination of all life forms including endospores and viruses.
  • 24. Figure 1.10 The pattern of deductive reasoning 24
  • 25. 25 Development of Aseptic Techniques • The human body is a source of infection – Dr. Oliver Wendell Holmes – observed that mothers of home births had fewer infections than those who gave birth in hospitals – Dr. Ignaz Semmelweis – correlated infections with physicians coming directly from autopsy room to maternity ward
  • 26. 26 • Joseph Lister – introduced aseptic techniques reducing microbes in medical settings and preventing wound infections – Involved disinfection of hands using chemicals prior to surgery – Use of heat for sterilization
  • 27. 27 Pathogens and Germ Theory of Disease • Many diseases are caused by the growth of microbes in the body and not by sins, bad character, or poverty, etc. • Two major contributors: Louis Pasteur and Robert Koch
  • 28. 28 Louis Pasteur (1822-1895) • Showed microbes caused fermentation and spoilage • Disproved spontaneous generation of microorganisms • Developed pasteurization • Demonstrated what is now known as Germ Theory of Disease Insert figure 1.11
  • 29. 29 Robert Koch (1843-1910) • Established Koch’s postulates - a sequence of experimental steps that verified the germ theory • Identified cause of anthrax, TB, and cholera • Developed pure culture methods Insert figure 1.12
  • 30. 1.7 Taxonomy • Taxonomy: organizing, classifying, and naming living things – Formal system originated by Carl von Linné • Concerned with: – Classification – orderly arrangement of organisms into groups – Nomenclature – assigning names – Identification – determining and recording traits of organisms for placement into taxonomic schemes 30
  • 31. 31 Levels of Classification • Domain - Archaea, Bacteria, & Eukarya • Kingdom • Phylum or Division • Class • Order • Family • Genus • Species
  • 32. Figure 1.13 Sample taxonomy 32
  • 33. 33 Assigning Specific Names • Binomial (scientific) nomenclature • Gives each microbe 2 names: – Genus - capitalized – species - lowercase • Both italicized or underlined – Staphylococcus aureus (S. aureus) • Inspiration for names is extremely varied and often imaginative
  • 34. 34 The Origin and Evolution of Microorganisms • Phylogeny: natural relatedness between groups of organisms • Evolution – All new species originate from preexisting species – Closely related organism have similar features because they evolved from common ancestral forms • Evolution usually progresses toward greater complexity
  • 35. 35 3 Domains • Bacteria - true bacteria • Archaea - odd bacteria that live in extreme environments, high salt, heat, etc. • Eukarya - have a nucleus and organelles
  • 36. 36