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Introduction to
Pharmacoepidemiology
Meles T. (BPharm, MSc)
SoP, MU
March, 2024
05/26/25 1
Focus areas of the course
Introduction
Study design
Data collection methods and tools
Drug utilization studies
Pharmacovigilance and drug safety
05/26/25 2
Introduction to Epidemiology
Learning objectives
By the end of this unit the students will be able to:
–Define epidemiology and explain its objectives;
–Discuss historical development of epidemiology;
–Define and understand the natural history of diseases;
–Know the different measures of disease prognosis;
–Understand disease causation in epidemiology
05/26/25 3
Epidemiology: definition
The word has a Greek origin: epi meaning “on or upon”,
“demos” meaning “ the common people” and “logs”
meaning “study”
(Pickett, JP, ed. The American Heritage Dictionary of English Language. 4th
Edition,
Boston, MA: Houghton Mifflin; 2000)
05/26/25 4
Definition cont’d
Epidemiology can also be defined as the branch of
medical science which treats epidemics
(Simpson, JA, Weiner ESC, eds. Oxford English Dictionary. 2nd
edition. Oxford,
England: Clarendon press; 1989, London Epidemiological Society, 1850.)
05/26/25 5
Definition cont’d
The study of the distribution and determinants of
disease frequency in
specified populations, and the application of this study to
control health problems
Source:
1.MacMoahon, B.,Trichopoulos, D. Epidemiology: Principles and Methods. 2nd
ed.
Boston, MA: Little, Brawn and co; 1996
2. Last, JM. A dictionary of Epidemiology, 4th
ed.. New York, NY: Oxford University Press;
2001.
05/26/25 6
Definition cont’d
Five key words/phrases
Population;
Disease frequency;
Disease distribution;
Disease determinants and
Disease control
05/26/25 7
Population
Population
Population refers to a group of people with a common
characteristics
such as place of residence, gender, age, or use of certain
medical services
Epidemiologists are concerned with the disease
occurrence in groups of people rather than individuals
Determining the size of the population in which disease
occurs is important to know the true frequency of
disease
05/26/25 8
Disease frequency
Quantifying how often a disease occurs in a population
Counting is a key activity of epidemiologists which
include three steps:
Developing a definition of disease;
Instituting a mechanism for counting cases of disease
within specified population and
Determining the size of the population
05/26/25 9
Disease Distribution
Analysis of disease patterns according to person, place,
and time
Who is getting the disease?
Where is it occurring?
When is it occurring?
How is it changing overtime?
05/26/25 10
Disease Distribution
Variations in disease frequency by the three
characteristics provide useful information that helps:
Understand the health status of a population;
Formulate hypothesis about the determinants;
Plan, implement and evaluate health programs
05/26/25 11
Disease Determinants
Factors that bring about a change in a person’s health
Determinants include both causal and preventive
factors
Determinants also include individual, environmental,
and societal
05/26/25 12
Disease control
EPIDEMIOLOGY PROVIDES
INFORMATION FOR ACTION
05/26/25 13
The objectives of Epidemiology
1. Causation:
 To identify the etiology or cause of a disease and relevant risk
factors; example, description of disease in terms of
 The kind of people affected and its geographic distribution led to discover
the association of pellagra and maize diet
 Knowing how the disease is transmitted would enable us to
intervene , reduce morbidity & mortality
05/26/25 14
Objectives cont’d
2. Study the natural history and prognosis of diseases
Some diseases are more severe than others;
some may be rapidly lethal and others may have
longer/shorter duration of survival
Defining the baseline natural history of a disease in
quantitative terms help to
develop new treatment/ prevention modalities
05/26/25 15
Objectives cont’d
3. Description of health status of the population
Determine the extent of disease found in the
community:
What are the actual and potential health problems in the
community?
Where are they?
Who is at risk?
Which problem is declining/increasing over time?
How these patterns relate to the level of and distribution of
services available?
05/26/25 16
Objectives cont’d
4. Evaluation of intervention
Example: Effectiveness of residual DDT spraying is
measured by reduction in the incidence of malaria
05/26/25 17
Epidemiological purpose and sequence:
Summary
1. Identifying disease/health problem
2. Linking with cause/risk factors
3. Establishing causal relationship
4. Designing an intervention for controlling health problem
5. Evaluating effectiveness of intervention
(MAXCY)
05/26/25 18
Selected Historical Developments
Epidemiology
05/26/25 19
Hippocrates (460-377BC)
The First Epidemiologist
Attempted to explain disease occurrence from rational instead
of supernatural viewpoint
Wrote three books: Epidemic I, Epidemic III, and On Airs,
Waters and Places
Recognized that different diseases occurred in different
places.
Example: malaria & yellow fever most commonly occurred in
swampy areas.
05/26/25 20
Hippocrates (460-377BC)…
The essentials of epidemiology noted by Hippocrates
included observation on how diseases
affected population and how disease spread particularly,
issues related to
time, seasons, place, & environmental conditions
His broader contribution to epidemiology is
“Epidemiological Observation”
05/26/25 21
John Graunt & Vital Statistics Development
In 1602 in London a systematic recording of deaths was
commenced,
“ Bills of Mortality”- weekly count of deaths
Graunt systematically recorded age, sex, who died, of
what, and where they died and when;
how many persons per year died of what kind of event.
1662: Published Natural & Political observations on the
Bills of Mortality
05/26/25 22
John Graunt & Vital Statistics Development
He drew many inferences about the patterns of fertility,
morbidity and mortality
by tabulating the Bills of Mortality,
He was the first to calculate &develop life tables and life
expectancy
Considered as Epidemiologist, statistician and
demographer
05/26/25 23
James Lind- Mid 1700s
Ship’s surgeon
1747: Conducted one of earliest experimental studies on
the treatment of scurvy, a common disease & cause of death
that time
He dismissed the popular ideas that scurvy was a
hereditary or infectious disease
The principal/main predisposing cause was moist air and
that its “occasional” cause was diet
05/26/25 24
Lind’s Experiment
 Took 12 patients with scurvy on board
 Patients are similar situation (putrid gums, the spots and lassitude, with
weaknesses of their knees, had one diet common to all)
 Design
 2 were with a quart of cyder a day, 2 took 25 gutts of elixir vitriol 3x a day;
2 took 2 spoonful of vinegar 3x/day; 2 of the worst patient under a course
of sea water; 2 had each two oranges & one lemon/day; 2 took nutmeg
3x/day.
 Observation: sudden and visible good effects were perceived
from the use of oranges and lemons.
05/26/25 25
William Farr (1807-1883)
 1839: Farr was appointed as Registrar General in England
and built on the ideas of Graunt
 Farr advanced the use of vital statistics.
 Devised a system which is the antecedent of modern
international classification of diseases.
 Farr was considered as the father of modern vital statistics
and disease surveillance
05/26/25 26
London Cholera Epidemic (1849-1854)
Finding the cause of Cholera was important issue
William Farr: adhered to “Miasmic theory”
05/26/25 27
Farr’s observational study
Elevation (ft) Deaths/10,000 inhabitants
< 20 120
20-40 65
40-60 34
60-80 27
80-100 22
100-120 17
340-360 8
Table 1. Deaths from cholera in 10,000 inhabitants by
elevation of residence above sea level, London (1848-
1849)
The lower the
elevation the higher
the mortality
05/26/25 28
John Snow
Anesthesiologist during the mid-1800s
Interested in the cause and spread of cholera
1849: he published his views on the causes and
transmission of cholera.
Snow conducted his classic study in 1854
Determine where persons with cholera lived and worked-
used the information to map the distribution of cases (spot map)
05/26/25 29
Snow’s Experiment
Water
Company
Population,
1851 census
Deaths
from
Cholera
Cholera death
rate/1000 popln
Southwark 167, 654 844 5.0
Lambeth 19,133 18 0.9
Table 2: Mortality from Cholera in the Districts of London
supplied by two water Companies, July –August 26, 1854
Risk of
mortality is
related to
drinking water
05/26/25 30
Natural History of Diseases
What is health and disease?
Disease, illness and sickness
What does it mean by natural history of disease?
05/26/25 31
Natural History of Diseases
Health is a difficulty concept to define
According to Advanced Learner’s Dictionary:
 Health is the state of being well and free from illness
There are two opposing models in the concept of Health:
a negative and positive models.
 A negative model : illness-wellness model
Health is the absence of the constraints of illness i.e. you are
healthy if you are not ill.
Disease A + Treatment A = Health
05/26/25 32
Definition of Health and Disease cont’d
Positive model of health – WHO’s definition
Health is a state of complete physical, mental, and social
wellbeing and not merely the absence of disease or infirmity.
It also includes the ability to lead a socially and economically
productive life.
05/26/25 33
Definition of Health and Disease cont’d
Disease is relatively simple to define and conceptualize
The opposite of ease.
Disease: physiological/psychological dysfunction
Illness: a subjective state of a person who feels aware of not
being well
Sickness: a state of social dysfunction.
05/26/25 34
Natural History of Diseases (NHD)
Exposure Onset of
symptoms
Pathological
changes
Usual time of diagnosis
Immunity &
Resistance
NHD: refers to the progress of a disease process in an individual overtime, in the
absence of an intervention
Incubation/latency period
05/26/25 35
Timing of prevention efforts in the NHD
primordial
& 1o
secondary tertiary
05/26/25 36
Timing of prevention efforts in the NHD..
A P
S
M D T
A: Biologic onset
P: Pathological evidence could be found if sought
S: Sign and symptoms develop
M:Medical care sought
D: Diagnosis
T: Treatment
05/26/25 37
Disease prognosis
Prognosis is a quantitative expression of the likelihood of
a specific outcome (survival)”
General issues:-
1. At what point to begin counting survival?
2. How is diagnosis made?
05/26/25 38
Identifying the endpoints of disease
Death
Cure
Remission (A decrease in, or disappearance of, signs and
symptoms of disease)
Recurrences
A return of disease
05/26/25 39
Prognosis
Death Survival
Case-fatality
Rate
5-year
survival
Observed
survival Median
survival
Relative
survival
40
05/26/25
Ways of expressing prognosis
1. Case Fatality Rate (CFR)
 Given that a person has a disease, what is the likelihood that
he/she will die of the disease?
 Number of people who died of a disease divided by the number
of people who have the disease.
 Suitable for diseases that are short –term/acute.
 In chronic diseases in which death occur many years after
diagnosis and the possibility of death from other causes
becomes more likely a CFR becomes less useful.
05/26/25 41
Ways of expressing prognosis…
2. Five Year Survival
A percent of patients who are alive 5-years after
treatment begins/ after diagnosis
Used as an index of success in cancer treatment.
Not appropriate measure if we want to measure less than five
years survival experience
Measure of success may be misleading if treatment start
either after the sign and symptoms appear or before that
through screening programs- Lead time bias
05/26/25 42
Five year survival
Example: Treatment outcome of breast cancer patient. Scenario I:
BO D&T→ 4-years survival Death
______↓_____________↓__________________↓_______
1987 1991 1995
Scenario II:
BO S&D&T → 6-years survival ← Death
______↓_____________↓__________________↓_______
1987 1989 1995
05/26/25 43
Ways of expressing prognosis…
Five year survival cont’d
Death occurred in 2015 in both scenarios.
Same patient could be classified as treatment success in
scenario II and failure in scenario I
05/26/25 44
Ways of expressing prognosis…
 To use the actual observed survival overtime using a life table
approach.
 Table 1: A hypothetical study of treatment results in patients
who were treated from 2010 to 2014 and followed to 2015.
Yr of
treatment
No of
patients
No alive on anniversary of treatment
2010
2011
2012
2013
2014
84
62
93
60
76
2011 2012 2013 2014 2015
44 21
31
13
14
50
10
10
20
29
8
6
13
16
43
05/26/25 45
Ways of expressing prognosis:
Observed survival..
Table 2: Analysis of survival in patients treated from 2010 to 2014 and followed
to 2015 (no lost to follow up)
Yr of
treatment
No. of
patients
No. alive at the end of Year
2010
2011
2012
2013
2014
Total
84
62
93
60
76
375
1st 2nd 3rd 4th 5th
44
31
50
29
43
197
21
14
20
16
71
13
10
13
36
10
6
16
8
8
05/26/25 46
Ways of expressing prognosis:
Observed survival…
The probability of surviving the first year is 197/375 = 0.52
P2 =71/197-43 = 0.46
P3= 36/71-16 = 0.65
P4 = 16/36-13 =0.70
P5 = 8/16-6 = 0.80
PT = p1xp2xp3xp4xp5 = 0.088 or 8.8%
05/26/25 47
Survival curve: percent surviving vs. years
of follow up
Fig 1: Survival curve for hypothetical example of patients treated from
2010-2014 and followed to 2015
05/26/25 48
Ways of expressing prognosis:
Median survival
The length of time that half of the study observation
Why should we use median rather than mean?
Less affected by extremes unlike mean
We need only to observe the deaths of half of the group to
calculate the median.
05/26/25 49
Ways of expressing prognosis:
relative survival
The ratio of the observed survival to expected survival
rate.
RSR = Observed survival in people with disease
Expected survival if disease were absent
 Let us consider 5-year survival rate for a group of 30-years old
men with colon cancer
What would you expect their survival to be if they did not
have colon cancer? What if we consider a group of 80-years
old men with the same disease? We wouldn’t expect
anything near 100% survival in a population of this age, even
without colon cancer.
05/26/25 50
Cause of Diseases
 Disease could be classified as
Acute or chronic based on its course
Infectious or non-infectious based on its cause
 A cause of disease is a factor (characteristic, behavior, event etc..)
that influences the occurrences of disease.
 If disease does not develop without the factor being present then
we term the causative factor “ sufficient”
 Example: Exposure to MTB is necessary for TB to develop but it is
not sufficient, because not everyone infected develops the
disease.
05/26/25 51
Theories/models to explain causation
Epidemiologic triangle/triad
Component causes/causal pies
05/26/25 52
Epidemiologic Triangle/Triad
Traditional model of disease causation;
Three components:
an external agent,
a susceptible host, and
an environment that brings the host and agent together;
05/26/25 53
Epidemiologic Triangle/Triad
Agent factors originally referred to infectious
microorganisms
These agents must be present for the disease to occur
(necessary but may not be sufficient)
In non-infectious diseases agent includes chemical and physical
causes of diseases
• Example: Nutritive elements (deficiencies like in Xerophthalmia,
kwashiorkor; : obesity); Chemical agents like poisons with co; physical
agents e.g. radiation
05/26/25 54
Epidemiologic Triangle/Triad
Host factors
factors that influence an individual’s exposure
susceptibility or response to a causative agent Example:
age, sex, race, socio-economic status, behaviors (smoking, drug
abuse, life style, sexual practices, eating habits), nutritional and
immunological status etc
05/26/25 55
Component causes and causal pies
Agent – host – environment model does not work well
for some non-infectious diseases
Another approach for explaining disease causation is
causal pies model – concept of multi-factorial nature of
disease causation
05/26/25 56
Conceptual scheme for causes of hypothetical
disease
Sufficient cause I Sufficient Cause II Sufficient Cause III
05/26/25 57
Component causes
 Factors represented by the pieces of pie are called component
causes
 Disease may have more than one sufficient cause with each
sufficient cause being component of several factors – different
ways leading to the same end.
 A single component cause is rarely a sufficient cause by itself
 Blocking any single component of a sufficient cause can prevent a
disease at least through that pathway.
05/26/25 58
Establishing the cause of diseases
Causal inference :
Process of determining whether the observed association is
likely to be causal
Before the association is assessed for causality, chance, bias
and confounding have to be excluded
05/26/25 59
Establishing causation
Bias
Any systematic error in the design, conduct or analysis of
the study that results
mistaken estimate of an exposure’s effect on the risk of the
disease.
Common types of bias in epidemiologic studies:
Selection bias
Misclassification bias (due to inaccuracies in the methods of
data acquisition)
Information bias (includes bias in abstracting records, recall
bias, interviewer bias, social desirability bias, measurement
bias)
05/26/25 60
Establishing causation…
Confounding
In a study of the association between exposure to a cause
and the occurrence of disease,
confounding occur when another exposure exists in the study
population and is associated both with the disease and
exposure being studied
In a study of whether factor A is a cause of disease B,
we say that a third factor, factor X is confounder, if the
followings are true:
05/26/25 61
Establishing causation - confounding
1. Factor X is a known risk factor for disease B.
2. Factor X is associated with factor A but not the result of
factor A.
X
? B
A
The confounder X is associated both with Exposure A and the disease B
05/26/25 62
Establishing causation - confounding
Examples:
 In the relationship between coffee and cancer of pancreas,
smoking is a confounder because:
 It is a known risk factor for pancreatic cancer,
 It is associated with coffee drinking but not the result of coffee
drinking
 Confounding may be the explanation for the relationship
between coffee consumption and coronary heart disease,
because:
It is well known that cigarette smoking is the cause of
coronary heart disease
It is also known that coffee consumption is associated with
cigarette smoking.
05/26/25 63
Establishing causation - confounding
Control of confounding
In the design stage:
Randomization – applicable only to experimental studies
Restriction – can limit the study to people who have particular
characteristics
Matching
oGroup matching: selecting controls in such a manner that
the proportion of controls with a certain characteristics is
identical to the proportion of cases with the same
characteristics
oIndividual matching: for each case selected , control is
selected who is similar to the case in terms of the specific
variable of concern
05/26/25 64
Establishing causation - confounding
At the analysis stage :
Stratification which involves the measurement of
strength of associations in well defined and
homogenous categories (strata) of the confounding
variable.
Statistical modeling: multivariate model controls a
number of confounding variables simultaneously.
05/26/25 65
Guidelines for establishing causation
The best known criteria for assessing causation were
proposed in 1965 by Sir Austin Bradford Hill : Hill’s
nine criteria or more appropriately termed as
guidelines.
05/26/25 66
Criteria for Causal Association
Surgeon General’s Report (1964)
1. Consistency
2. Strength —Dose-response
3. Specificity
4. Temporality
5. Coherence
Hill’s Criteria (1965)
1. Strength
2. Consistency
3. Specificity
4. Temporality
5. Biological gradient
6. Plausibility
7. Coherence
8. Experiment
9. Analogy
Source: Hill AB. The Environment and Disease: Association or Causation? Proceedings of
the Royal Society of Medicine 1965; 58:295-300.
05/26/25 67
Guidelines for establishing causation
1. Temporal relation:
 Does the cause precede the effect?
2. Plausibility:
 Is the association consistent with other
knowledge? Mechanism of action; evidence from
experimental animal.
3. Consistency
 Have similar results been shown in other studies?
05/26/25 68
Guidelines contd..
4. Strength
 What is the strength of the association between cause and
effect? RR>2 can be considered as strong. Cigarette smoking
is approximately twofold increase in the risk of MI
compared to non-smokers.
5. Dos- response relationship:
 Is increased exposure to possible cause associated with
increased effect? Occurs when changes in the level of
possible cause are associated with changes in the
prevalence and incidence of the effect. Example, prevalence
of hearing loss increases with noise level and exposure time.
05/26/25 69
Guidelines contd..
6. Reversibility:
 Does the removal of a possible cause lead to
reduction of disease risk?
7. Study design:
 Is the evidence based on strong study design?
 Strength of evidence:
 RCT : Strong evidence
 Cohort : Moderate
 Case-control : Moderate
 Cross-sectional: Weak
 Ecological: Weak
05/26/25 70
Guidelines contd..
8. Specificity of association:
 Certain exposure should be associated with single
outcome
 Weakest of all criteria
 Considered as an additional support if others hold
true.
71
05/26/25
Thank You!
05/26/25 72

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Introduction to Pharmacy EPI-Lecture.ppt

  • 1. Introduction to Pharmacoepidemiology Meles T. (BPharm, MSc) SoP, MU March, 2024 05/26/25 1
  • 2. Focus areas of the course Introduction Study design Data collection methods and tools Drug utilization studies Pharmacovigilance and drug safety 05/26/25 2
  • 3. Introduction to Epidemiology Learning objectives By the end of this unit the students will be able to: –Define epidemiology and explain its objectives; –Discuss historical development of epidemiology; –Define and understand the natural history of diseases; –Know the different measures of disease prognosis; –Understand disease causation in epidemiology 05/26/25 3
  • 4. Epidemiology: definition The word has a Greek origin: epi meaning “on or upon”, “demos” meaning “ the common people” and “logs” meaning “study” (Pickett, JP, ed. The American Heritage Dictionary of English Language. 4th Edition, Boston, MA: Houghton Mifflin; 2000) 05/26/25 4
  • 5. Definition cont’d Epidemiology can also be defined as the branch of medical science which treats epidemics (Simpson, JA, Weiner ESC, eds. Oxford English Dictionary. 2nd edition. Oxford, England: Clarendon press; 1989, London Epidemiological Society, 1850.) 05/26/25 5
  • 6. Definition cont’d The study of the distribution and determinants of disease frequency in specified populations, and the application of this study to control health problems Source: 1.MacMoahon, B.,Trichopoulos, D. Epidemiology: Principles and Methods. 2nd ed. Boston, MA: Little, Brawn and co; 1996 2. Last, JM. A dictionary of Epidemiology, 4th ed.. New York, NY: Oxford University Press; 2001. 05/26/25 6
  • 7. Definition cont’d Five key words/phrases Population; Disease frequency; Disease distribution; Disease determinants and Disease control 05/26/25 7
  • 8. Population Population Population refers to a group of people with a common characteristics such as place of residence, gender, age, or use of certain medical services Epidemiologists are concerned with the disease occurrence in groups of people rather than individuals Determining the size of the population in which disease occurs is important to know the true frequency of disease 05/26/25 8
  • 9. Disease frequency Quantifying how often a disease occurs in a population Counting is a key activity of epidemiologists which include three steps: Developing a definition of disease; Instituting a mechanism for counting cases of disease within specified population and Determining the size of the population 05/26/25 9
  • 10. Disease Distribution Analysis of disease patterns according to person, place, and time Who is getting the disease? Where is it occurring? When is it occurring? How is it changing overtime? 05/26/25 10
  • 11. Disease Distribution Variations in disease frequency by the three characteristics provide useful information that helps: Understand the health status of a population; Formulate hypothesis about the determinants; Plan, implement and evaluate health programs 05/26/25 11
  • 12. Disease Determinants Factors that bring about a change in a person’s health Determinants include both causal and preventive factors Determinants also include individual, environmental, and societal 05/26/25 12
  • 14. The objectives of Epidemiology 1. Causation:  To identify the etiology or cause of a disease and relevant risk factors; example, description of disease in terms of  The kind of people affected and its geographic distribution led to discover the association of pellagra and maize diet  Knowing how the disease is transmitted would enable us to intervene , reduce morbidity & mortality 05/26/25 14
  • 15. Objectives cont’d 2. Study the natural history and prognosis of diseases Some diseases are more severe than others; some may be rapidly lethal and others may have longer/shorter duration of survival Defining the baseline natural history of a disease in quantitative terms help to develop new treatment/ prevention modalities 05/26/25 15
  • 16. Objectives cont’d 3. Description of health status of the population Determine the extent of disease found in the community: What are the actual and potential health problems in the community? Where are they? Who is at risk? Which problem is declining/increasing over time? How these patterns relate to the level of and distribution of services available? 05/26/25 16
  • 17. Objectives cont’d 4. Evaluation of intervention Example: Effectiveness of residual DDT spraying is measured by reduction in the incidence of malaria 05/26/25 17
  • 18. Epidemiological purpose and sequence: Summary 1. Identifying disease/health problem 2. Linking with cause/risk factors 3. Establishing causal relationship 4. Designing an intervention for controlling health problem 5. Evaluating effectiveness of intervention (MAXCY) 05/26/25 18
  • 20. Hippocrates (460-377BC) The First Epidemiologist Attempted to explain disease occurrence from rational instead of supernatural viewpoint Wrote three books: Epidemic I, Epidemic III, and On Airs, Waters and Places Recognized that different diseases occurred in different places. Example: malaria & yellow fever most commonly occurred in swampy areas. 05/26/25 20
  • 21. Hippocrates (460-377BC)… The essentials of epidemiology noted by Hippocrates included observation on how diseases affected population and how disease spread particularly, issues related to time, seasons, place, & environmental conditions His broader contribution to epidemiology is “Epidemiological Observation” 05/26/25 21
  • 22. John Graunt & Vital Statistics Development In 1602 in London a systematic recording of deaths was commenced, “ Bills of Mortality”- weekly count of deaths Graunt systematically recorded age, sex, who died, of what, and where they died and when; how many persons per year died of what kind of event. 1662: Published Natural & Political observations on the Bills of Mortality 05/26/25 22
  • 23. John Graunt & Vital Statistics Development He drew many inferences about the patterns of fertility, morbidity and mortality by tabulating the Bills of Mortality, He was the first to calculate &develop life tables and life expectancy Considered as Epidemiologist, statistician and demographer 05/26/25 23
  • 24. James Lind- Mid 1700s Ship’s surgeon 1747: Conducted one of earliest experimental studies on the treatment of scurvy, a common disease & cause of death that time He dismissed the popular ideas that scurvy was a hereditary or infectious disease The principal/main predisposing cause was moist air and that its “occasional” cause was diet 05/26/25 24
  • 25. Lind’s Experiment  Took 12 patients with scurvy on board  Patients are similar situation (putrid gums, the spots and lassitude, with weaknesses of their knees, had one diet common to all)  Design  2 were with a quart of cyder a day, 2 took 25 gutts of elixir vitriol 3x a day; 2 took 2 spoonful of vinegar 3x/day; 2 of the worst patient under a course of sea water; 2 had each two oranges & one lemon/day; 2 took nutmeg 3x/day.  Observation: sudden and visible good effects were perceived from the use of oranges and lemons. 05/26/25 25
  • 26. William Farr (1807-1883)  1839: Farr was appointed as Registrar General in England and built on the ideas of Graunt  Farr advanced the use of vital statistics.  Devised a system which is the antecedent of modern international classification of diseases.  Farr was considered as the father of modern vital statistics and disease surveillance 05/26/25 26
  • 27. London Cholera Epidemic (1849-1854) Finding the cause of Cholera was important issue William Farr: adhered to “Miasmic theory” 05/26/25 27
  • 28. Farr’s observational study Elevation (ft) Deaths/10,000 inhabitants < 20 120 20-40 65 40-60 34 60-80 27 80-100 22 100-120 17 340-360 8 Table 1. Deaths from cholera in 10,000 inhabitants by elevation of residence above sea level, London (1848- 1849) The lower the elevation the higher the mortality 05/26/25 28
  • 29. John Snow Anesthesiologist during the mid-1800s Interested in the cause and spread of cholera 1849: he published his views on the causes and transmission of cholera. Snow conducted his classic study in 1854 Determine where persons with cholera lived and worked- used the information to map the distribution of cases (spot map) 05/26/25 29
  • 30. Snow’s Experiment Water Company Population, 1851 census Deaths from Cholera Cholera death rate/1000 popln Southwark 167, 654 844 5.0 Lambeth 19,133 18 0.9 Table 2: Mortality from Cholera in the Districts of London supplied by two water Companies, July –August 26, 1854 Risk of mortality is related to drinking water 05/26/25 30
  • 31. Natural History of Diseases What is health and disease? Disease, illness and sickness What does it mean by natural history of disease? 05/26/25 31
  • 32. Natural History of Diseases Health is a difficulty concept to define According to Advanced Learner’s Dictionary:  Health is the state of being well and free from illness There are two opposing models in the concept of Health: a negative and positive models.  A negative model : illness-wellness model Health is the absence of the constraints of illness i.e. you are healthy if you are not ill. Disease A + Treatment A = Health 05/26/25 32
  • 33. Definition of Health and Disease cont’d Positive model of health – WHO’s definition Health is a state of complete physical, mental, and social wellbeing and not merely the absence of disease or infirmity. It also includes the ability to lead a socially and economically productive life. 05/26/25 33
  • 34. Definition of Health and Disease cont’d Disease is relatively simple to define and conceptualize The opposite of ease. Disease: physiological/psychological dysfunction Illness: a subjective state of a person who feels aware of not being well Sickness: a state of social dysfunction. 05/26/25 34
  • 35. Natural History of Diseases (NHD) Exposure Onset of symptoms Pathological changes Usual time of diagnosis Immunity & Resistance NHD: refers to the progress of a disease process in an individual overtime, in the absence of an intervention Incubation/latency period 05/26/25 35
  • 36. Timing of prevention efforts in the NHD primordial & 1o secondary tertiary 05/26/25 36
  • 37. Timing of prevention efforts in the NHD.. A P S M D T A: Biologic onset P: Pathological evidence could be found if sought S: Sign and symptoms develop M:Medical care sought D: Diagnosis T: Treatment 05/26/25 37
  • 38. Disease prognosis Prognosis is a quantitative expression of the likelihood of a specific outcome (survival)” General issues:- 1. At what point to begin counting survival? 2. How is diagnosis made? 05/26/25 38
  • 39. Identifying the endpoints of disease Death Cure Remission (A decrease in, or disappearance of, signs and symptoms of disease) Recurrences A return of disease 05/26/25 39
  • 41. Ways of expressing prognosis 1. Case Fatality Rate (CFR)  Given that a person has a disease, what is the likelihood that he/she will die of the disease?  Number of people who died of a disease divided by the number of people who have the disease.  Suitable for diseases that are short –term/acute.  In chronic diseases in which death occur many years after diagnosis and the possibility of death from other causes becomes more likely a CFR becomes less useful. 05/26/25 41
  • 42. Ways of expressing prognosis… 2. Five Year Survival A percent of patients who are alive 5-years after treatment begins/ after diagnosis Used as an index of success in cancer treatment. Not appropriate measure if we want to measure less than five years survival experience Measure of success may be misleading if treatment start either after the sign and symptoms appear or before that through screening programs- Lead time bias 05/26/25 42
  • 43. Five year survival Example: Treatment outcome of breast cancer patient. Scenario I: BO D&T→ 4-years survival Death ______↓_____________↓__________________↓_______ 1987 1991 1995 Scenario II: BO S&D&T → 6-years survival ← Death ______↓_____________↓__________________↓_______ 1987 1989 1995 05/26/25 43
  • 44. Ways of expressing prognosis… Five year survival cont’d Death occurred in 2015 in both scenarios. Same patient could be classified as treatment success in scenario II and failure in scenario I 05/26/25 44
  • 45. Ways of expressing prognosis…  To use the actual observed survival overtime using a life table approach.  Table 1: A hypothetical study of treatment results in patients who were treated from 2010 to 2014 and followed to 2015. Yr of treatment No of patients No alive on anniversary of treatment 2010 2011 2012 2013 2014 84 62 93 60 76 2011 2012 2013 2014 2015 44 21 31 13 14 50 10 10 20 29 8 6 13 16 43 05/26/25 45
  • 46. Ways of expressing prognosis: Observed survival.. Table 2: Analysis of survival in patients treated from 2010 to 2014 and followed to 2015 (no lost to follow up) Yr of treatment No. of patients No. alive at the end of Year 2010 2011 2012 2013 2014 Total 84 62 93 60 76 375 1st 2nd 3rd 4th 5th 44 31 50 29 43 197 21 14 20 16 71 13 10 13 36 10 6 16 8 8 05/26/25 46
  • 47. Ways of expressing prognosis: Observed survival… The probability of surviving the first year is 197/375 = 0.52 P2 =71/197-43 = 0.46 P3= 36/71-16 = 0.65 P4 = 16/36-13 =0.70 P5 = 8/16-6 = 0.80 PT = p1xp2xp3xp4xp5 = 0.088 or 8.8% 05/26/25 47
  • 48. Survival curve: percent surviving vs. years of follow up Fig 1: Survival curve for hypothetical example of patients treated from 2010-2014 and followed to 2015 05/26/25 48
  • 49. Ways of expressing prognosis: Median survival The length of time that half of the study observation Why should we use median rather than mean? Less affected by extremes unlike mean We need only to observe the deaths of half of the group to calculate the median. 05/26/25 49
  • 50. Ways of expressing prognosis: relative survival The ratio of the observed survival to expected survival rate. RSR = Observed survival in people with disease Expected survival if disease were absent  Let us consider 5-year survival rate for a group of 30-years old men with colon cancer What would you expect their survival to be if they did not have colon cancer? What if we consider a group of 80-years old men with the same disease? We wouldn’t expect anything near 100% survival in a population of this age, even without colon cancer. 05/26/25 50
  • 51. Cause of Diseases  Disease could be classified as Acute or chronic based on its course Infectious or non-infectious based on its cause  A cause of disease is a factor (characteristic, behavior, event etc..) that influences the occurrences of disease.  If disease does not develop without the factor being present then we term the causative factor “ sufficient”  Example: Exposure to MTB is necessary for TB to develop but it is not sufficient, because not everyone infected develops the disease. 05/26/25 51
  • 52. Theories/models to explain causation Epidemiologic triangle/triad Component causes/causal pies 05/26/25 52
  • 53. Epidemiologic Triangle/Triad Traditional model of disease causation; Three components: an external agent, a susceptible host, and an environment that brings the host and agent together; 05/26/25 53
  • 54. Epidemiologic Triangle/Triad Agent factors originally referred to infectious microorganisms These agents must be present for the disease to occur (necessary but may not be sufficient) In non-infectious diseases agent includes chemical and physical causes of diseases • Example: Nutritive elements (deficiencies like in Xerophthalmia, kwashiorkor; : obesity); Chemical agents like poisons with co; physical agents e.g. radiation 05/26/25 54
  • 55. Epidemiologic Triangle/Triad Host factors factors that influence an individual’s exposure susceptibility or response to a causative agent Example: age, sex, race, socio-economic status, behaviors (smoking, drug abuse, life style, sexual practices, eating habits), nutritional and immunological status etc 05/26/25 55
  • 56. Component causes and causal pies Agent – host – environment model does not work well for some non-infectious diseases Another approach for explaining disease causation is causal pies model – concept of multi-factorial nature of disease causation 05/26/25 56
  • 57. Conceptual scheme for causes of hypothetical disease Sufficient cause I Sufficient Cause II Sufficient Cause III 05/26/25 57
  • 58. Component causes  Factors represented by the pieces of pie are called component causes  Disease may have more than one sufficient cause with each sufficient cause being component of several factors – different ways leading to the same end.  A single component cause is rarely a sufficient cause by itself  Blocking any single component of a sufficient cause can prevent a disease at least through that pathway. 05/26/25 58
  • 59. Establishing the cause of diseases Causal inference : Process of determining whether the observed association is likely to be causal Before the association is assessed for causality, chance, bias and confounding have to be excluded 05/26/25 59
  • 60. Establishing causation Bias Any systematic error in the design, conduct or analysis of the study that results mistaken estimate of an exposure’s effect on the risk of the disease. Common types of bias in epidemiologic studies: Selection bias Misclassification bias (due to inaccuracies in the methods of data acquisition) Information bias (includes bias in abstracting records, recall bias, interviewer bias, social desirability bias, measurement bias) 05/26/25 60
  • 61. Establishing causation… Confounding In a study of the association between exposure to a cause and the occurrence of disease, confounding occur when another exposure exists in the study population and is associated both with the disease and exposure being studied In a study of whether factor A is a cause of disease B, we say that a third factor, factor X is confounder, if the followings are true: 05/26/25 61
  • 62. Establishing causation - confounding 1. Factor X is a known risk factor for disease B. 2. Factor X is associated with factor A but not the result of factor A. X ? B A The confounder X is associated both with Exposure A and the disease B 05/26/25 62
  • 63. Establishing causation - confounding Examples:  In the relationship between coffee and cancer of pancreas, smoking is a confounder because:  It is a known risk factor for pancreatic cancer,  It is associated with coffee drinking but not the result of coffee drinking  Confounding may be the explanation for the relationship between coffee consumption and coronary heart disease, because: It is well known that cigarette smoking is the cause of coronary heart disease It is also known that coffee consumption is associated with cigarette smoking. 05/26/25 63
  • 64. Establishing causation - confounding Control of confounding In the design stage: Randomization – applicable only to experimental studies Restriction – can limit the study to people who have particular characteristics Matching oGroup matching: selecting controls in such a manner that the proportion of controls with a certain characteristics is identical to the proportion of cases with the same characteristics oIndividual matching: for each case selected , control is selected who is similar to the case in terms of the specific variable of concern 05/26/25 64
  • 65. Establishing causation - confounding At the analysis stage : Stratification which involves the measurement of strength of associations in well defined and homogenous categories (strata) of the confounding variable. Statistical modeling: multivariate model controls a number of confounding variables simultaneously. 05/26/25 65
  • 66. Guidelines for establishing causation The best known criteria for assessing causation were proposed in 1965 by Sir Austin Bradford Hill : Hill’s nine criteria or more appropriately termed as guidelines. 05/26/25 66
  • 67. Criteria for Causal Association Surgeon General’s Report (1964) 1. Consistency 2. Strength —Dose-response 3. Specificity 4. Temporality 5. Coherence Hill’s Criteria (1965) 1. Strength 2. Consistency 3. Specificity 4. Temporality 5. Biological gradient 6. Plausibility 7. Coherence 8. Experiment 9. Analogy Source: Hill AB. The Environment and Disease: Association or Causation? Proceedings of the Royal Society of Medicine 1965; 58:295-300. 05/26/25 67
  • 68. Guidelines for establishing causation 1. Temporal relation:  Does the cause precede the effect? 2. Plausibility:  Is the association consistent with other knowledge? Mechanism of action; evidence from experimental animal. 3. Consistency  Have similar results been shown in other studies? 05/26/25 68
  • 69. Guidelines contd.. 4. Strength  What is the strength of the association between cause and effect? RR>2 can be considered as strong. Cigarette smoking is approximately twofold increase in the risk of MI compared to non-smokers. 5. Dos- response relationship:  Is increased exposure to possible cause associated with increased effect? Occurs when changes in the level of possible cause are associated with changes in the prevalence and incidence of the effect. Example, prevalence of hearing loss increases with noise level and exposure time. 05/26/25 69
  • 70. Guidelines contd.. 6. Reversibility:  Does the removal of a possible cause lead to reduction of disease risk? 7. Study design:  Is the evidence based on strong study design?  Strength of evidence:  RCT : Strong evidence  Cohort : Moderate  Case-control : Moderate  Cross-sectional: Weak  Ecological: Weak 05/26/25 70
  • 71. Guidelines contd.. 8. Specificity of association:  Certain exposure should be associated with single outcome  Weakest of all criteria  Considered as an additional support if others hold true. 71 05/26/25