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Automated	Machine	Learning	
(AutoML)	and	Pentaho
Caio Moreno	de	Souza
Pentaho	Senior	Consultant,	Hitachi	Vantara
Agenda
We	will	discuss	how	Automated	Machine	Learning	(AutoML)	and	Pentaho,	
together,	can	help	customers	save	time	in	the	process	of	creating	a	model	and	
deploying	this	model	into	production.
• Business	Case	for	Automated	Machine	Learning	(AutoML)	and	Pentaho;
• High	level	overview	about	Automated	Machine	Learning	(AutoML);
• Demonstrations		(Pentaho	+	AutoML).
The	Perfect	Model	Does	Not	Exist
“All	models	are	wrong,	
but	some	are	useful.”
– GEORGE	BOX,	1919-2013
Business	Case	for	AutoML	and	Pentaho
• Finding	the	correct	machine	learning	algorithm	is	not	an	easy	task.
• You	need	to	find	a	balance	between	the	time	you	would	need	to	spend	and	the	
time	you	can	actually	spend	on	the	ML	problem.
• To	create	a	good	model	you	will	need	to	know	very	well	the	problem,	the	
variables	(instances),	prepare	the	data,	feature	engineering	and	test	different	
algorithms.
• Some	data	scientists	will	also	say	to	add	a	little	bit	of	MAGIC	J.
• Adding,	of	course,	in	most	cases,	a	lot	of	computer	power.
Machine	Learning	High-Level	Overview
What	is	Automated	Machine	Learning	(AutoML)?
Illustration	by	Shyam Sundar Srinivasan
What	is	Automated	Machine	Learning	(AutoML)?
“Machine	learning	is	very	successful,	but	its	successes	crucially	rely	on	
human	machine	learning	experts,	who	select	appropriate	ML	architectures	
(deep	learning	architectures	or	more	traditional	ML	workflows)	and	their	
hyperparameters.	As	the	complexity	of	these	tasks	is	often	beyond	non-
experts,	the	rapid	growth	of	machine	learning	applications	has	created	a	
demand	for	off-the-shelf	machine	learning	methods	that	can	be	used	
easily	and	without	expert	knowledge.	We	call	the	resulting	research	area	
that	targets	progressive	automation	of	machine	learning	AutoML.”
https://sites.google.com/site/automl2016/
Why	Automated	Machine	Learning	(AutoML)?
• The	demand	for	machine	learning	experts	has	outpaced	the	supply.	
To	address	this	gap,	there	have	been	big	strides	in	the	development	
of	user-friendly	machine	learning	software	that	can	be	used	by	non-
experts	and	experts,	alike.	
• AutoML	software	can	be	used	for	automating	a	large	part	of	the	
machine	learning	workflow,	which	includes	automatic	training	and	
tuning	of	many	models	within	a	user-specified	time-limit.
What	is	NOT	Automated	Machine	Learning	(AutoML)?
• AutoML is	not	automated	data	science;	
• AutoML will	not	replace	Data	Scientist;
– All	the	methods	of	automated	machine	learning	are	developed	to	support	data	
scientists,	not	to	replace	them.
– AutoML is	to	free	data	scientists	from	the	burden	of	repetitive	and	time-consuming	
tasks	(e.g.,	machine	learning	pipeline	design	and	hyperparameter	optimization)	so	
they	can	better	spend	their	time	on	tasks	that	are	much	more	difficult	to	automate.
Auto	ML	Tools
• Auto	Weka	(Open	Source)
– http://www.cs.ubc.ca/labs/beta/Projects/autoweka/
• H2o.ai	AutoML	(Open	Source)
– https://www.h2o.ai/
• TPOT	(Open	Source)
– https://github.com/rhiever/tpot
• Auto	Sklearn	(Open	Source)
– https://github.com/automl/auto-sklearn
– http://automl.github.io/auto-sklearn/stable/
• machineJS (Open	Source)
– https://github.com/ClimbsRocks/machineJS
PDI	+	AutoML
Machine	Learning	with	Pentaho	in	4	Steps
http://www.pentaho.com/blog/4-steps-machine-learning-pentaho
CRISP-DM	
http://www.pentaho.com/blog/4-steps-machine-learning-pentaho
Business	
Understanding
Data
Understanding
Data
Preparation
Modeling
Evaluation
Deployment
Data
Use	Case:	AutoML	+	Pentaho
• Our	users	have	a	well	defined	ML	problem	and	the	initial	
version	of	the	dataset	(train	and	test).
• Unfortunately,	they	haven’t	created	a	ML	model	yet.
• Also,	they	have	no	idea	how	to	create	it.
• And	they	want	us	to	help	them	to	create	it	as	soon	as	
possible	using	only	Open	Source	tools.
The	Journey
• If	you	embark	in	this	journey,	you	can	stick	in	this	problem	forever…
…or	you	can	find	quick	ways	to	do	it	in	a	specified	time.
• Customers	can	then	spend	enough	time	later	to	improve	their	current	Model.	
• The	next	steps	will	be:
– Hire	a	data	scientist	or	a	team	of	data	scientists;
– Hire	a	domain	expert	in	that	problem.
Our	Goal
• In	this	specific	scenario,	our	goal	will	be	to	help	them	to	start	the	process	of	
creating	a	dummy	model	using	AutoML.
Create	Your	First	ML	Model
1. Define	the	problem;
2. Analyze	and	prepare	the	data;
3. Select	algorithms	(start	simple);
4. Run	and	evaluate	the	algorithms;
5. Improve	the	results	with	focused	experiments;
6. Finalize	results	with	fine	tuning.
Sample	Dataset
• More	data	is	better,	but	more	data	means	more	complexity.
• More	data	means	more	time	that	you	will	have	to	spend	in	your	problem.
• Why	not	create	a	sample	dataset?!
– Create	1	to	20	datasets	to	test	your	problem	and	create	your	models;
Demo	AutoML	+	Pentaho
• This	presentation	aims	to	demo	the	process	of	how	AutoML open	source	
tools	and	Pentaho,	together,	can	help	customers	save	time	in	the	process	
of	creating	a	model	and	deploying	this	model	into	production.
The	Power	of	PDI
• PDI	(Pentaho	Data	Integration)	will	help	data	scientist	and	data	engineers	with	
data	onboarding,	data	preparation,	data	blending,	model	orchestration	(model	
and	predict),	saving	and	visualizing	the	data.
Data	Onboarding,	Data	Preparation	and	Data	Blending
• Below	we	can	see	a	Data	Preparation	Process	using	PDI	(Pentaho	Data	Integration);
• ML	dataset	output:	ARFF	File	(Weka	File),	CSV	(Python,	R	and	Apache	Spark	MLlib)	
and	Hadoop	Output	to	save	the	txt	file	to	the	Data	Lake;
Predicting	New	Values	Using	Your	Model
Demonstration
Demo	Agenda
What	we	will	cover	in	the	demo:
• Data	Preparation	with	PDI;
• Model	creation	using	AutoML Tool;
• Model	Deployment	with	PDI;
Pentaho	Data	Integration	+	H2O	AutoML
Summary
What	we	covered	today:
• Business	Case	for	Automated	Machine	Learning	(AutoML)	and	Pentaho;
• High	level	overview	about	Automated	Machine	Learning	(AutoML);
• Demonstrations	(Pentaho	+	AutoML).
Next	Steps
Want	to	learn	more?
• Talk	to	me	during	Pentaho	World	2017	or	send	me	an	e-mail	
caio.moreno@HitachiVantara.com;
• Meet-the-Experts:	
– https://www.pentahoworld.com/meet-the-experts
Pentaho World 2017: Automated Machine Learning (AutoML) and Pentaho (Thursday, October 26th, 2017)
Appendices
Top	Prediction	Algorithms
• According	to	Dataiku,	the	top	prediction	
algorithms	are	the	ones	explained	in	the	
image	on	the	right	side.
• This	image	also	explains	(resumes)	the	
advantages	and	disadvantages	of	each	
algorithm.	
Source:
https://blog.dataiku.com/machine-learning-explained-algorithms-are-your-friend
Algorithms
REXER	analytics	data	science	survey*	gives	us	a	good	idea	
about	which	algorithms	have	been	used	over	the	years.
*	Special	thanks	to	Mark	Hall	(Pentaho)	for	sharing	this	document	with	me.
Document	available	at:	http://www.rexeranalytics.com/data-science-survey.html
Core	Algorithms
Source: http://www.rexeranalytics.com/files/Rexer_Data_Science_Survey_Highlights_Apr-2016.pdf
Tools
• The	huge	amount	of	tools	
increases	the	complexity.
Source: http://www.rexeranalytics.com/files/Rexer_Data_Science_Survey_Highlights_Apr-2016.pdf
Auto	Weka
• Auto	Weka
– provides	automatic	selection	of	models	and	hyperparameters	for WEKA.
– http://www.cs.ubc.ca/labs/beta/Projects/autoweka/
• Open	datasets	for	Auto	Weka
– http://www.cs.ubc.ca/labs/beta/Projects/autoweka/datasets/
Auto	Sklearn
• Auto	Weka	inspired	the	authors	of	Auto	Sklearn;
• Auto	Sklearn
– auto-sklearn	is	an	automated	machine	learning	toolkit	and	a	drop-in	replacement	for	a	
scikit-learn	estimator.
– https://github.com/automl/auto-sklearn
– http://automl.github.io/auto-sklearn/stable/
Types	of	ML	Problems	with	(AutoML)
• The	types	of	Machine	Learning	problems	that	we	can	solve	using	Auto	Weka	and	
Auto	Sklearn are	Classification,	Regression	and	Clustering:
– Classification	and	Regression	are	already	supported	in	Auto-sklearn	&	Auto-WEKA.
– For	clustering,	you	can	use	as	long	as	you	have	an	objective	function	to	optimize.
Automated	by	TPOT
• TPOT	will	automate	the	most	tedious	part	of	machine	learning	by	intelligently	
exploring	thousands	of	possible	pipelines	to	find	the	best	one	for	your	data.
https://github.com/rhiever/tpot
Auto	ML	Tools	Installation
Installing	Auto	Weka
• To	install	AutoWeka,	go	to	
Weka	Package	Manager	>	
Search	for	Auto-WEKA	and	
click	the	“Install”	button.
Installing	TPOT
• Command	to	install	TPOT
– $	pip	install	tpot
• Learn	more:
– http://rhiever.github.io/tpot/installing/
Installing	Auto	Sklearn	on	Ubuntu
• Use	the	documentation	below	to	help	you:
– http://automl.github.io/auto-sklearn/stable/
• Run	this	command	on	ubuntu	terminal:
– $	conda	install	gcc	swig
– $	curl	https://raw.githubusercontent.com/automl/auto-
sklearn/master/requirements.txt	|	xargs	-n	1	-L	1	pip	install
– $	sudo	apt-get	install	build-essential	swig
– $	pip	install	–U	auto-sklearn
Error	Auto	Sklearn	on	Ubuntu
• Error	reported	on	June,	14th 2017.	Solution	sent	on	the	same	day.
• Check	the	GitHub	link	below	to	find	the	solution:	
https://github.com/automl/auto-sklearn/issues/308
Installing	H20.ai
• To	install	H20.ai	AutoML	visit	the	websites:
– https://blog.h2o.ai/2017/06/automatic-machine-learning/
– https://www.h2o.ai/
Auto	ML	Demonstration
Using	Auto	Weka
• timeLimit	=	You	can	define	the	
time	in	minutes	that you	want	
Auto	Weka	to	use	to	run	and	
find	the	best	option.
– More	time	=	better	results
Using	Auto	Weka
• You	can	run	Auto	Weka	from	the	Weka	Explorer	User	Interface
Using	Auto	Weka
• For	better	performance,	try	giving	Auto-WEKA	more	time
Using	Auto	Weka
• Auto	Weka	output	results
Testing	Auto	Sklearn
• Open	Spyder	and	test	the	code	below:
Source	code:	http://automl.github.io/auto-sklearn/stable/
Testing	Auto	Sklearn with	Iris	Dataset
Testing	H2o.ai	AutoML
To	test	H2o	AutoML	is	necessary	to	install	
the	version	3.11.0.3888	or	superior.	
http://h2o-release.s3.amazonaws.com/h2o/rel-vapnik/1/index.html
https://github.com/caiomsouza/machine-learning-orchestration/blob/master/AutoML/src/r/h2o-automl/H20_AutoML_Example.R
aml	<- h2o.automl(x	=	x,	y	=	y,
training_frame	=	train,
leaderboard_frame	=	test,
max_runtime_secs	=	30)
#	View	the	AutoML	Leaderboard
lb	<- aml@leaderboard
lb
Demo	AutoML	(Auto	Weka)	+	Pentaho
• Using	Auto	Weka	
from	the	Weka	User	
Interface	we	created	
a	first	“dummy”	
model	in	15	minutes.
• Auto	Weka	will	output	
the	best	model	created	
in	the	time	specified,	
this	model	can	then	be	
used	to	predict	new	
values.
Auto	Weka	output
No	Free	Lunch	Theorem
https://ti.arc.nasa.gov/m/profile/dhw/papers/78.pdf
http://www.no-free-lunch.org/
http://philosophy.wisc.edu/forster/papers/Krakow.pdf

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Pentaho World 2017: Automated Machine Learning (AutoML) and Pentaho (Thursday, October 26th, 2017)