Productionizing Spark and the Spark Job Server

Productionizing Spark 
and the Spark REST Job Server
Evan Chan
Distinguished Engineer
@TupleJump

Who am I
• Distinguished Engineer, Tuplejump
• @evanfchan
• http://github.com/velvia
• User and contributor to Spark since 0.9
• Co-creator and maintainer of Spark Job Server
2

TupleJump
✤ Tuplejump is a big data technology leader providing solutions and
development partnership.
✤ FiloDB - Spark-based analytics database for time series and event
data (github.com/tuplejump/FiloDB)
✤ Calliope - the ﬁrst Spark-Cassandra integration
✤ Stargate - an open source Lucene indexer for Cassandra
✤ SnackFS - open source HDFS for Cassandra
3

TupleJump - Big Data Dev Partners 4

Choices, choices, choices
• YARN, Mesos, Standalone?
• With a distribution?
• What environment?
• How should I deploy?
• Hosted options?
• What about dependencies?
6

BasicTerminology
• The Spark documentation is really quite good.
7

What all the clusters have in common
• YARN, Mesos, and Standalone all support the following
features:
–Running the Spark driver app in cluster mode
–Restarts of the driver app upon failure
–UI to examine state of workers and apps
8

Spark Standalone Mode
• The easiest clustering mode to deploy**
–Use make-distribution.sh to package, copy to all nodes
–sbin/start-master.sh on master node, then start slaves
–Test with spark-shell
• HA Master through Zookeeper election
• Must dedicate whole cluster to Spark
• In latest survey, used by almost half of Spark users
9

Apache Mesos
• Was started by Matias in 2007 before he worked on Spark!
• Can run your entire company on Mesos, not just big data
–Great support for micro services - Docker, Marathon
–Can run non-JVM workloads like MPI
• Commercial backing from Mesosphere
• Heavily used at Twitter and AirBNB
• The Mesosphere DCOS will revolutionize Spark et al deployment - “dcos package
install spark” !!
10

Mesos vsYARN
• Mesos is a two-level resource manager, with pluggable schedulers
–You can run YARN on Mesos, with YARN delegating resource offers
to Mesos (Project Myriad)
–You can run multiple schedulers within Mesos, and write your own
• If you’re already a Hadoop / Cloudera etc shop, YARN is easy choice
• If you’re starting out, go 100% Mesos
11

Mesos Coarse vs Fine-Grained
• Spark offers two modes to run Mesos Spark apps in (and you can
choose per driver app):
–coarse-grained: Spark allocates ﬁxed number of workers for
duration of driver app
–ﬁne-grained (default): Dynamic executor allocation per task,
but higher overhead per task
• Use coarse-grained if you run low-latency jobs
12

What about Datastax DSE?
• Cassandra, Hadoop, Spark all bundled in one distribution, collocated
• Custom cluster manager and HA/failover logic for Spark Master,
using Cassandra gossip
• Can use CFS (Cassandra-based HDFS), SnackFS, or plain Cassandra
tables for storage
–or use Tachyon to cache, then no need to collocate (use Mesosphere
DCOS)
13

Hosted Apache Spark
• Spark on Amazon EMR - ﬁrst class citizen now
–Direct S3 access!
• Google Compute Engine - “Click to Deploy” Hadoop+Spark
• Databricks Cloud
• Many more coming
• What you notice about the different environments:
–Everybody has their own way of starting: spark-submit vs dse spark vs aws
emr … vs dcos spark …
14

Mesosphere DCOS
• Automates deployment to AWS,
Google, etc.
• Common API and UI, better cost
and control, cloud
• Load balancing and routing,
Mesos for resource sharing
• dcos package install spark
15

Building Spark
• Make sure you build for the right Hadoop version
• eg mvn -Phadoop-2.2 -Dhadoop.version=2.2.0 -DskipTests clean package
• Make sure you build for the right Scala version - Spark supports
both 2.10 and 2.11
17

Jars schmars
• Dependency conﬂicts are the worst part of Spark dev
• Every distro has slightly different jars - eg CDH < 5.4 packaged a different version of
Akka
• Leave out Hive if you don’t need it
• Use the Spark UI “Environment” tab to check jars and how they got there
• spark-submit —jars / —packages forwards jars to every executor (unless it’s an
HDFS / HTTP path)
• Spark-env.sh SPARK_CLASSPATH - include dep jars you’ve deployed to every node
18

Jars schmars
• You don’t need to package every dependency with your Spark application!
• spark-streaming is included in the distribution
• spark-streaming includes some Kafka jars already
• etc.
19

ClassPath Configuration Options
• spark.driver.userClassPathFirst, spark.executor.userClassPathFirst
• One way to solve dependency conflicts - make sure YOUR jars are loaded first, ahead of
Spark’s jars
• Client mode: use spark-submit options
• —driver-class-path, —driver-library-path
• Spark Classloader order of resolution
• Classes specified via —jars, —packages first (if above flag is set)
• Everything else in SPARK_CLASSPATH
20

Some useful config options
21
spark.serializer org.apache.spark.serializer.KryoSerializer
spark.default.parallelism or pass # partitions for shuffle/reduce tasks as second arg
spark.scheduler.mode
FAIR - enable parallelism within apps (multi-tenant or
low-latency apps like SQL server)
spark.shuffle.memoryFraction,
spark.storage.memoryFraction
Fraction of Java heap to allocate for shuffle and RDD
caching, respectively, before spilling to disk
spark.cleaner.ttl
Enables periodic cleanup of cached RDDs, good for long-
lived jobs
spark.akka.frameSize
Increase the default of 10 (MB) to send back very large
results to the driver app (code smell)
spark.task.maxFailures # of retries for task failure is this - 1

Control Spark SQL Shuffles
• By default, Spark SQL / DataFrames will use 200
partitions when doing any groupBy / distinct operations
• sqlContext.setConf( 
"spark.sql.shuffle.partitions", "16")
22

Prevent temp files from filling disks
• (Spark Standalone mode only)
• spark.worker.cleanup.enabled = true
• spark.worker.cleanup.interval
• Conﬁguring executor log ﬁle retention/rotation
spark.executor.logs.rolling.maxRetainedFiles = 90
spark.executor.logs.rolling.strategy = time
23

Tuning Spark GC
• Lots of cached RDDs = huge old gen GC cycles, stop-the-world GC
• Know which operations consume more memory (sorts, shufﬂes)
• Try the new G1GC … avoids whole-heap scans
• -XX:+UseG1GC
• https://databricks.com/blog/2015/05/28/tuning-java-garbage-collection-for-
spark-applications.html
24

Run your apps in the cluster
• spark-submit: —deploy-mode cluster
• Spark Job Server: deploy SJS to the cluster
• Drivers and executors are very chatty - want to reduce latency and decrease
chance of networking timeouts
• Want to avoid running jobs on your local machine
26

Automatic Driver Restarts
• Standalone: —deploy-mode cluster —supervise
• YARN: —deploy-mode cluster
• Mesos: use Marathon to restart dead slaves
• Periodic checkpointing: important for recovering data
• RDD checkpointing helps reduce long RDD lineages
27

Speeding up application startup
• Spark-submit’s —packages option is super convenient for downloading
dependencies, but avoid it in production
• Downloads tons of jars from Maven when driver starts up, then executors
copy all the jars from driver
• Deploy frequently used dependencies to worker nodes yourself
• For really fast Spark jobs, use the Spark Job Server and share a SparkContext
amongst jobs!
28

Spark(Context) Metrics
• Spark’s built in MetricsSystem has sources (Spark info, JVM, etc.) and sinks
(Graphite, etc.)
• Conﬁgure metrics.properties (template in spark conf/ dir) and use these
params to spark-submit
--files=/path/to/metrics.properties
--conf spark.metrics.conf=metrics.properties
• See http://www.hammerlab.org/2015/02/27/monitoring-spark-with-graphite-
and-grafana/
29

Application Metrics
• Missing Hadoop counters? Use Spark Accumulators
• https://gist.github.com/ibuenros/
9b94736c2bad2f4b8e23
• Above registers accumulators as a source to Spark’s
MetricsSystem
30

Watch how RDDs are cached
• RDDs cached to disk could slow down computation
31

Are your jobs stuck?
• First check cluster resources - does a job have enough CPU/mem?
• Take a thread dump of executors:
32

TheWorst Killer - Classpath
• Classpath / jar versioning issues may cause Spark to hang silently. Debug
using the Environment tab of the UI:
33

35
http://github.com/spark-jobserver/spark-jobserver
Open Source!!
Also ﬁnd it on spark-packages.org

Spark Job Server -What
• REST Interface for your Spark jobs
• Streaming, SQL, extendable
• Job history and conﬁguration logged to a database
• Enable interactive low-latency queries (SQL/Dataframes
works too) of cached RDDs and tables
36

Spark Job Server -Where
37
Kafka
Spark
Streaming
Datastore Spark
Spark Job
Server
Internal users Internet
HTTP/HTTPS

Spark Job Server -Why
• Spark as a service
• Share Spark across the Enterprise
• HTTPS and LDAP Authentication
• Enterprises - easy integration with other teams, any language
• Share in-memory RDDs across logical jobs
• Low-latency queries
38

Used in Production -Worldwide
39

Used in Production
• As of last month, ofﬁcially included in  
Datastax Enterprise 4.8!
40

Active Community
• Large number of contributions from community
• HTTPS/LDAP contributed by team at KNIME
• Multiple committers
• Gitter IM channel, active Google group
41

Platform Independent
• Spark Standalone
• Mesos
• Yarn
• Docker
• Example: platform-independent LDAP auth, HTTPS, can be
used as a portal
42

Creating a Job Server Project
• sbt assembly -> fat jar -> upload to job server
• "provided" is used. Don’t want SBT assembly to include
the whole job server jar.
• Java projects should be possible too
44
resolvers += "Job Server Bintray" at "https://dl.bintray.com/spark-
jobserver/maven"
libraryDependencies += "spark.jobserver" % "job-server-api" %
"0.5.0" % "provided"
• In your build.sbt, add this

/**
* A super-simple Spark job example that implements the SparkJob trait and
* can be submitted to the job server.
*/
object WordCountExample extends SparkJob {
override def validate(sc: SparkContext, config: Config): SparkJobValidation =
{
Try(config.getString(“input.string”))
.map(x => SparkJobValid)
.getOrElse(SparkJobInvalid(“No input.string”))
}
override def runJob(sc: SparkContext, config: Config): Any = {
val dd = sc.parallelize(config.getString(“input.string”).split(" ").toSeq)
dd.map((_, 1)).reduceByKey(_ + _).collect().toMap
}
}
Example Job Server Job
45

What’s Different?
• Job does not create Context, Job Server does
• Decide when I run the job: in own context, or in pre-created context
• Allows for very modular Spark development
• Break up a giant Spark app into multiple logical jobs
• Example:
• One job to load DataFrames tables
• One job to query them
• One job to run diagnostics and report debugging information
46

Submitting and Running a Job
47
✦ curl --data-binary @../target/mydemo.jar localhost:8090/
jars/demo
OK[11:32 PM] ~
✦ curl -d "input.string = A lazy dog jumped mean dog"
'localhost:8090/jobs?
appName=demo&classPath=WordCountExample&sync=true'
{
"status": "OK",
"RESULT": {
"lazy": 1,
"jumped": 1,
"A": 1,
"mean": 1,
"dog": 2
}
}

Retrieve Job Statuses
48
~/s/jobserver (evan-working-1 ↩=) curl 'localhost:8090/jobs?
limit=2'
[{
"duration": "77.744 secs",
"classPath": "ooyala.cnd.CreateMaterializedView",
"startTime": "2013-11-26T20:13:09.071Z",
"context": "8b7059dd-ooyala.cnd.CreateMaterializedView",
"status": "FINISHED",
"jobId": "9982f961-aaaa-4195-88c2-962eae9b08d9"
}, {
"duration": "58.067 secs",
"classPath": "ooyala.cnd.CreateMaterializedView",
"startTime": "2013-11-26T20:22:03.257Z",
"context": "d0a5ebdc-ooyala.cnd.CreateMaterializedView",
"status": "FINISHED",
"jobId": "e9317383-6a67-41c4-8291-9c140b6d8459"
}]

Spark as a Query Engine
• Goal: spark jobs that run in under a second and answers queries on shared
RDD data
• Query params passed in as job conﬁg
• Need to minimize context creation overhead
–Thus many jobs sharing the same SparkContext
• On-heap RDD caching means no serialization loss
• Need to consider concurrent jobs (fair scheduling)
50

51
RDDLoad Data Query JobSpark 
Executors
Cassandra
REST Job Server
Query Job
Query
Result
Query
Result
new SparkContext
Create
query
context
Load
some
data

Sharing Data Between Jobs
• RDD Caching
–Beneﬁt: no need to serialize data. Especially useful for indexes etc.
–Job server provides a NamedRdds trait for thread-safe CRUD of cached
RDDs by name
• (Compare to SparkContext’s API which uses an integer ID and is not
thread safe)
• For example, at Ooyala a number of ﬁelds are multiplexed into the RDD
name: timestamp:customerID:granularity
52

Data Concurrency
• With fair scheduler, multiple Job Server jobs can run simultaneously on one
SparkContext
• Managing multiple updates to RDDs
–Cache keeps track of which RDDs being updated
–Example: thread A spark job creates RDD “A” at t0
–thread B fetches RDD “A” at t1 > t0
–Both threads A and B, using NamedRdds, will get the RDD at time t2 when
thread A ﬁnishes creating the RDD “A”
53

Spark SQL/Hive Query Server
✤ Start a context based on SQLContext: 
curl -d "" '127.0.0.1:8090/contexts/sql-context?context-
factory=spark.jobserver.context.SQLContextFactory'
✤ Run a job for loading and caching tables in DataFrames 
curl -d "" '127.0.0.1:8090/jobs?
appName=test&classPath=spark.jobserver.SqlLoaderJob&context=sql-
context&sync=true'
✤ Supply a query to a Query Job. All queries are logged in database by Spark
Job Server. 
curl -d ‘sql=“SELECT count(*) FROM footable”’ '127.0.0.1:8090/jobs?
appName=test&classPath=spark.jobserver.SqlQueryJob&context=sql-
context&sync=true'
54

Example: Combining Streaming And Spark SQL
55
SparkSQLStreamingContext
Kafka Streaming
Job
SQL
Query Job
DataFrames
Spark Job Server
SQL Query

SparkSQLStreamingJob
56
trait SparkSqlStreamingJob extends SparkJobBase {
type C = SQLStreamingContext
}
class SQLStreamingContext(c: SparkContext) {
val streamingContext = new StreamingContext(c, ...)
val sqlContext = new SQLContext(c)
}
Now you have access to both StreamingContext and
SQLContext, and it can be shared across jobs!

SparkSQLStreamingContext
57
To start this context: 
curl -d "" “localhost:8090/contexts/stream_sqltest?context-
factory=com.abc.SQLStreamingContextFactory"
class SQLStreamingContextFactory extends SparkContextFactory {
import SparkJobUtils._
type C = SQLStreamingContext with ContextLike
def makeContext(config: Config, contextConfig: Config, contextName: String): C = {
val batchInterval = contextConfig.getInt("batch_interval")
val conf = configToSparkConf(config, contextConfig, contextName)
new SQLStreamingContext(new SparkContext(conf), Seconds(batchInterval)) with ContextLike {
def sparkContext: SparkContext = this.streamingContext.sparkContext
def isValidJob(job: SparkJobBase): Boolean = job.isInstanceOf[SparkSqlStreamingJob]
// Stop the streaming context, but not the SparkContext so that it can be re-used
// to create another streaming context if required:
def stop() { this.streamingContext.stop(false) }
}
}
}

Future Plans
• PR: Forked JVMs for supporting many concurrent
contexts
• True HA operation
• Swagger API documentation
59

HA for Job Server
Job
Server 1
Job
Server 2
Active
Job
Context
Gossip
Load balancer
60
Database
GET /jobs/<id>

HA and Hot Failover for Jobs
Job
Server 1
Job
Server 2
Active
Job
Context
HDFS
Standby
Job
Context
Gossip
Checkpoint
61

Thanks for your contributions!
• All of these were community contributed:
–HTTPS and Auth
–saving and retrieving job conﬁguration
–forked JVM per context
• Your contributions are very welcome on Github!
62

63
And Everybody is Hiring!!
Thank you!

WhyWe Needed a Job Server
• Our vision for Spark is as a multi-team big data service
• What gets repeated by every team:
• Bastion box for running Hadoop/Spark jobs
• Deploys and process monitoring
• Tracking and serializing job status, progress, and job results
• Job validation
• No easy way to kill jobs
• Polyglot technology stack - Ruby scripts run jobs, Go services

Completely Async Design
✤ http://spray.io - probably the fastest JVM HTTP
microframework
✤ Akka Actor based, non blocking
✤ Futures used to manage individual jobs. (Note that
Spark is using Scala futures to manage job stages now)
✤ Single JVM for now, but easy to distribute later via
remote Actors / Akka Cluster

Async Actor Flow
Spray web
API
Request
actor
Local
Supervisor
Job
Manager
Job 1
Future
Job 2
Future
Job Status
Actor
Job Result
Actor

Metadata Store
✤ JarInfo, JobInfo, ConfigInfo
✤ JobSqlDAO. Store metadata to SQL database by JDBC interface.
✤ Easily configured by spark.sqldao.jdbc.url
✤ jdbc:mysql://dbserver:3306/jobserverdb
✤ Multiple Job Servers can share the same MySQL.
✤ Jars uploaded once but accessible by all servers.
✤ The default will be JobSqlDAO and H2.
✤ Single H2 DB file. Serialization and deserialization are handled by H2.

Deployment and Metrics
✤ spark-jobserver repo comes with a full suite of tests and
deploy scripts:
✤ server_deploy.sh for regular server pushes
✤ server_package.sh for Mesos and Chronos .tar.gz
✤ /metricz route for codahale-metrics monitoring
✤ /healthz route for health check

Challenges and Lessons
• Spark is based around contexts - we need a Job Server oriented around logical
jobs
• Running multiple SparkContexts in the same process
• Better long term solution is forked JVM per SparkContext
• Workaround: spark.driver.allowMultipleContexts = true
• Dynamic jar and class loading is tricky
• Manage threads carefully - each context uses lots of threads

Productionizing Spark and the Spark Job Server

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