Enhancing soybean rust resistance through Rpp2,
   Rpp3 and Rpp4 pair wise gene pyramiding




   M. Maphosa, Talwana, H & Tukamuhabwa, P
Introduction

•Soybean rust is an obligate fungal parasite with multiple
hosts
•It is a polycyclic disease with multiple re-infections

•Genetic resistance is a long term solution

•However, single genes have been overcome in certain
areas whilst others show increasing susceptibility

•To enhance single gene resistance & broaden the base for
available resistance genes
Introduction


•Conventional gene pyramiding is a challenge

•It is not practically feasible in some cases

•Marker assisted gene pyramiding may be a possible solution

•Given that some of the resistance genes have markers
associated with them

•No attempt has be done to use identified SSR for MAS
pyramiding & effect of pyramiding genes
Study 1

•Validate the use of SSR in pyramiding resistance genes Rpp2,
Rpp3 and Rpp4
Study 1


Marker     Linkage Group   Position1   Resistance Gene         Reference
                             (cM)


Sat_255          J          43.85           Rpp2           Silva et al. (2008)

 Satt620         J          53.71           Rpp2           Silva et al. (2008)

 Satt460        C2         111.87           Rpp3           Hyten et al. (2009)

 Sat263         C2         118.78           Rpp3           Hyten et al. (2009)

 Satt288        G           76.77           Rpp4         Yamanaka et al. (2008)

AF162283        G           87.94           Rpp4         Yamanaka et al.(2008)
Study 1
Study 1
Study 2


•Evaluating the most effective resistance gene combination
using sporulation & severity indices
Study 2

• All parents has severities higher that the pair wise
combinations
•In the F3 generation
Major Findings

• Complementary gene interactions occurred resulting in
  enhanced resistance
• The effectiveness of resistance is influenced by the genetic
  background of introgression
• Independent genetic control of severity and sporulation in
  soybean rust
• Disproportinate contribution of resistance, Rpp3 more
  dominant
Recommendations

• MAS gene pyramiding is feasible

• Introgression to elite lines

• Evalution of pairwise genes in other areas

• Assessing for durability of the resistance
Acknowledgements


•RUFORUM

•International Foundation for Science (4968-1)

•Makerere University Soybean breeding programme
Pyramiding rust

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Pyramiding rust

  • 1. Enhancing soybean rust resistance through Rpp2, Rpp3 and Rpp4 pair wise gene pyramiding M. Maphosa, Talwana, H & Tukamuhabwa, P
  • 2. Introduction •Soybean rust is an obligate fungal parasite with multiple hosts •It is a polycyclic disease with multiple re-infections •Genetic resistance is a long term solution •However, single genes have been overcome in certain areas whilst others show increasing susceptibility •To enhance single gene resistance & broaden the base for available resistance genes
  • 3. Introduction •Conventional gene pyramiding is a challenge •It is not practically feasible in some cases •Marker assisted gene pyramiding may be a possible solution •Given that some of the resistance genes have markers associated with them •No attempt has be done to use identified SSR for MAS pyramiding & effect of pyramiding genes
  • 4. Study 1 •Validate the use of SSR in pyramiding resistance genes Rpp2, Rpp3 and Rpp4
  • 5. Study 1 Marker Linkage Group Position1 Resistance Gene Reference (cM) Sat_255 J 43.85 Rpp2 Silva et al. (2008) Satt620 J 53.71 Rpp2 Silva et al. (2008) Satt460 C2 111.87 Rpp3 Hyten et al. (2009) Sat263 C2 118.78 Rpp3 Hyten et al. (2009) Satt288 G 76.77 Rpp4 Yamanaka et al. (2008) AF162283 G 87.94 Rpp4 Yamanaka et al.(2008)
  • 8. Study 2 •Evaluating the most effective resistance gene combination using sporulation & severity indices
  • 9. Study 2 • All parents has severities higher that the pair wise combinations •In the F3 generation
  • 10. Major Findings • Complementary gene interactions occurred resulting in enhanced resistance • The effectiveness of resistance is influenced by the genetic background of introgression • Independent genetic control of severity and sporulation in soybean rust • Disproportinate contribution of resistance, Rpp3 more dominant
  • 11. Recommendations • MAS gene pyramiding is feasible • Introgression to elite lines • Evalution of pairwise genes in other areas • Assessing for durability of the resistance
  • 12. Acknowledgements •RUFORUM •International Foundation for Science (4968-1) •Makerere University Soybean breeding programme