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Molecular Genetics
DNA:

  Genetic
 control of
  protein
 structure
and function
James Watson (L) and Francis Crick (R), and the model

          they built of the structure of DNA
Overview of DNA Structure
The structure of DNA and RNA


 Genetic material of living organisms is
  either DNA or RNA.
 DNA – Deoxyribonucleic acid

 RNA – Ribonucleic acid



 Genes are lengths of DNA that code for
 particular proteins.
DNA and RNA are polynucleotides

  Both  DNA and RNA are polynucleotides.
  They are made up of smaller molecules
   called nucleotides. Nucleotide
    DNA is made of two polynucleotide strands:

Nucleotide    Nucleotide     Nucleotide    Nucleotide    Nucleotide

Nucleotide    Nucleotide     Nucleotide    Nucleotide    Nucleotide


    RNA is made of a single polynucleotide strand:
 Nucleotide     Nucleotide    Nucleotide    Nucleotide    Nucleotide
Structure of a nucleotide
A nucleotide is made
  of 3 components:
 A Pentose sugar

 This is a 5 carbon
  sugar
 The sugar in DNA
  is deoxyribose.
 The sugar in RNA is
  ribose.
Structure of a nucleotide
 A Phosphate group
 Phosphate groups
  are important
  because they link
  the sugar on one
  nucleotide onto the
  phosphate of the
  next nucleotide to
  make a
  polynucleotide.
Structure of a nucleotide
   A Nitrogenous base

   In DNA the four bases
    are:
    –   Thymine
    –   Adenine
    –   Cytosine
    –   Guanine

   In RNA the four bases
    are:
    –   Uracil
    –   Adenine
    –   Cytosine
    –   Guanine
Nitrogenous bases – Two types
   Pyrimidines      Purines

  Thymine - T     Adenine   -A
  Cytosine - C    Guanine   -G
   Uracil - U
Adenine
Guanine
Structure of dna and replication2012
The Structure of DNA and RNA
Sugar phosphate bonds (backbone
                of DNA)
 Nucleotides are
  connected to each
  other via the
  phosphate on one
  nucleotide and the
  sugar on the next
  nucleotide
 A Polynucleotide
Ladder Configuration and DNA
        Replication
Base pairing
   The Nitrogenous
    Bases pair up with
    other bases. For
    example the bases
    of one strand of
    DNA base pair with
    the bases on the
    opposite strand of
    the DNA.
Structure of dna and replication2012
The Rule:
 Adenine
        always base pairs with
 Thymine (or Uracil if RNA)

 Cytosine   always base pairs with
 Guanine.

 Basesare held together by weak
 hydrogen bonds (bonds between
 hydrogen and F, N, or O)
Complementary base pairing
Purines                        Pyrimidines

Adenine                        Thymine
Adenine                        Uracil

Guanine                        Cytosine
  THE DNA Sequence Game - Wanna Play?
The
 Replication
  of DNA-
THE S PHASE
Structure of dna and replication2012
Structure of dna and replication2012
The 5’ to 3’ – 3’ to 5’ Rule
 As   far a 5-3 and 3 to 5:
  – If one strand goes from 5’ to 3’, the
    other goes from 3’ to 5’

  5’- ATGCAACTCGAC – 3’
  3’- TACGTTGAGCTG – 5’
  Always observe the Base Pair Rule!
Replication
DNA Replication – Ann’y
Overview of DNA Replication
DNA REPLICATION OVERVIEW
   Involves 20 different enzymes and other
    proteins.

 IN THREE MAJOR STEPS: (S PHASE)
1. Enzymes attach to existing DNA
    –   Break Hydrogen Bonds between base pairs
    –   Double Helix unwinds(TEMPLATE for new bases)
    –   Enzyme - Helicase
2. NEW AND MATCHING strand is
  SYNTHESIZED for each existing strand.
            DNA POLYMERASE – enzymes that carries out
             replication of strand.
            Work in ONE direction
            Work from opposite ends of strands.
3. New strands are sealed by - LIGASE
Simplified illustration of replication
   The two strands of DNA separate from one another
   Each strand serves as a template (model) for a new strand
   Each new DNA molecule consists of one old strand and one new
    strand
Structure of dna and replication2012
Structure of dna and replication2012
Structure of dna and replication2012
Structure of dna and replication2012
Replication Forks
            Areas where
             DNA double
             strands have
             been “unzipped”
             for replication to
             occur.
Structure of dna and replication2012
Structure of dna and replication2012
Structure of dna and replication2012

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Structure of dna and replication2012

  • 2. DNA: Genetic control of protein structure and function
  • 3. James Watson (L) and Francis Crick (R), and the model they built of the structure of DNA
  • 4. Overview of DNA Structure
  • 5. The structure of DNA and RNA  Genetic material of living organisms is either DNA or RNA.  DNA – Deoxyribonucleic acid  RNA – Ribonucleic acid  Genes are lengths of DNA that code for particular proteins.
  • 6. DNA and RNA are polynucleotides  Both DNA and RNA are polynucleotides.  They are made up of smaller molecules called nucleotides. Nucleotide  DNA is made of two polynucleotide strands: Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide  RNA is made of a single polynucleotide strand: Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide
  • 7. Structure of a nucleotide A nucleotide is made of 3 components:  A Pentose sugar  This is a 5 carbon sugar  The sugar in DNA is deoxyribose.  The sugar in RNA is ribose.
  • 8. Structure of a nucleotide  A Phosphate group  Phosphate groups are important because they link the sugar on one nucleotide onto the phosphate of the next nucleotide to make a polynucleotide.
  • 9. Structure of a nucleotide  A Nitrogenous base  In DNA the four bases are: – Thymine – Adenine – Cytosine – Guanine  In RNA the four bases are: – Uracil – Adenine – Cytosine – Guanine
  • 10. Nitrogenous bases – Two types Pyrimidines Purines Thymine - T Adenine -A Cytosine - C Guanine -G Uracil - U
  • 14. The Structure of DNA and RNA
  • 15. Sugar phosphate bonds (backbone of DNA)  Nucleotides are connected to each other via the phosphate on one nucleotide and the sugar on the next nucleotide  A Polynucleotide
  • 16. Ladder Configuration and DNA Replication
  • 17. Base pairing  The Nitrogenous Bases pair up with other bases. For example the bases of one strand of DNA base pair with the bases on the opposite strand of the DNA.
  • 19. The Rule:  Adenine always base pairs with Thymine (or Uracil if RNA)  Cytosine always base pairs with Guanine.  Basesare held together by weak hydrogen bonds (bonds between hydrogen and F, N, or O)
  • 20. Complementary base pairing Purines Pyrimidines Adenine Thymine Adenine Uracil Guanine Cytosine THE DNA Sequence Game - Wanna Play?
  • 21. The Replication of DNA- THE S PHASE
  • 24. The 5’ to 3’ – 3’ to 5’ Rule  As far a 5-3 and 3 to 5: – If one strand goes from 5’ to 3’, the other goes from 3’ to 5’ 5’- ATGCAACTCGAC – 3’ 3’- TACGTTGAGCTG – 5’ Always observe the Base Pair Rule!
  • 26. Overview of DNA Replication
  • 27. DNA REPLICATION OVERVIEW  Involves 20 different enzymes and other proteins.  IN THREE MAJOR STEPS: (S PHASE) 1. Enzymes attach to existing DNA – Break Hydrogen Bonds between base pairs – Double Helix unwinds(TEMPLATE for new bases) – Enzyme - Helicase 2. NEW AND MATCHING strand is SYNTHESIZED for each existing strand.  DNA POLYMERASE – enzymes that carries out replication of strand.  Work in ONE direction  Work from opposite ends of strands. 3. New strands are sealed by - LIGASE
  • 28. Simplified illustration of replication  The two strands of DNA separate from one another  Each strand serves as a template (model) for a new strand  Each new DNA molecule consists of one old strand and one new strand
  • 33. Replication Forks  Areas where DNA double strands have been “unzipped” for replication to occur.