Fuse'ing python for rapid development of storage efficient
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The document discusses the development of file systems in user space using FUSE (Filesystem in Userspace) and Python, highlighting its advantages over traditional kernel-space file systems. It outlines the architecture of FUSE, the necessary components, and provides an overview of the SEFS (storage efficient file system) with features like de-duplication and compression. Additionally, it emphasizes the ease of using Python for file system development, including implementation details and a variety of creative applications for FUSE-based file systems.
![seFS: Code (1)
def getattr(self, path):
sefs = seFS()
stat = fuse.stat()
context = fuse.FuseGetContext()
#Root
if path == '/':
stat.stat_nlink = 2
stat.stat_mode = stat.S_IFDIR | 0755
else:
stat.stat_mode = stat.S_IFREG | 0777
stat.stat_nlink = 1
stat.stat_uid, stat.stat_gid =
(context ['uid'], context
['gid'])
# Search for this path in DB
ret = sefs.search(path)
# If file exists in DB, get its times
if ret is True:
tup = sefs.getutime(path)
stat.stat_mtime =
int(tup[0].strip().split('.')[0])
stat.stat_ctime =
int(tup[1].strip().split('.')[0])
stat.stat_atime =
int(tup[2].strip().split('.')[0])
stat.stat_ino =
int(sefs.getinode(path))
# Get the file size from DB
if sefs.getlength(path) is not None:
stat.stat_size =
int(sefs.getlength(path))
else:
stat.stat_size = 0
return stat
else:
return - errno.ENOENT](https://image.slidesharecdn.com/vfgcef6sqsa9uukboxbr-signature-b094eef3ce35ba0179b087c1802141a6c1b4b5ff9021f64dad640c06a0b2af6b-poli-140809125846-phpapp02/85/Fuse-ing-python-for-rapid-development-of-storage-efficient-16-320.jpg)
Fuse'ing python for rapid development of storage efficient
- 1. 'FUSE'ing Python for rapid development of storage efficient file-system PyCon APAC ‘12 Singapore, Jun 07-09, 2012 Chetan Giridhar, Vishal Kanaujia
- 2. File Systems • Provides way to organize, store, retrieve and manage information • Abstraction layer • File system: – Maps name to an object – Objects to file contents • File system types (format): – Media based file systems (FAT, ext2) – Network file systems (NFS) – Special-purpose file systems (procfs) • Services – open(), read(), write(), close()… User space Kernel space User File System Hardware
- 3. Virtual File-system • To support multiple FS in *NIX • VFS is an abstract layer in kernel • Decouples file system implementation from the interface (POSIX API) – Common API serving different file system types • Handles user calls related to file systems. – Implements generic FS actions – Directs request to specific code to handle the request • Associate (and disassociate) devices with instances of the appropriate file system.
- 4. File System: VFS ext2 NFS procfs User VFS glibc.so Kernel space Block layer/ Device drivers/Hardware System call interface glibc.so: open(), read() Myapp.py: open(), read() System call: sys_open(), sys_read() VFS: vfs_open(), vfs_read()
- 5. Developing FS in *NIX • In-kernel file-systems (traditionally) • It is a complex task • Understanding kernel libraries and modules • Development experience in kernel space • Managing disk i/o • Time consuming and tedious development – Frequent kernel panic – Higher testing efforts • Kernel bloating and side effects like security
- 6. Solution: User space • In user space: – Shorter development cycle – Easy to update fixes, test and distribute – More flexibility • Programming tools, debuggers, and libraries as you have if you were developing standard *NIX applications • User-space file-systems – File systems become regular applications (as opposed to kernel extensions)
- 7. FUSE (Filesystem in USErspace) • Implement a file system in user-space – no kernel code required! • Secure, non-privileged mounts • User operates on a mounted instance of FS: - Unix utilities - POSIX libraries • Useful to develop “virtual” file-systems – Allows you to imagine “anything” as a file ☺ – local disk, across the network, from memory, or any other combination
- 8. FUSE: Diving deeper Myfile.py: open() glibc.so VFS: vfs_open() fuse.ko /dev/fuse libfuse.so CustomFS: open()
- 9. FUSE | develop • Choices of development in C, C++, Java, … and of course Python! • Python interface for FUSE – (FusePython: most popularly used) • Open source project – http://fuse.sourceforge.net/ • For ubuntu systems: $sudo apt-get instatall python-fuse $mkdir ./mount_point $python myfuse.py ./mount_point $fusermount -u ./mount_point
- 10. FUSE API Overview • File management – open(path) – create(path, mode) – read(path, length, offset) – write(path, data, offset) • Directory and file system management – unlink(path) – readdir(path) • Metadata operations – getattr(path) – chmod(path, mode) – chown(path, uid, gid)
- 11. seFS – storage efficient FS • A prototype, experimental file system with: – Online data de-duplication (SHA1) – Compression (text based) • SQLite • Ubuntu 11.04, Python-Fuse Bindings • Provides following services: open() write() chmod() create() readdir() chown() read() unlink()
- 12. seFS Architecture Your application <<FUSE code>> myfuse.py File System Operations seFS DB storage Efficiency = De-duplication + Compression<<pylibrary>> SQLiteHandler.py Compression.py Crypto.py <<SQLite DB Interface>> seFS.py
- 13. seFS: Database seFS Schema CREATE TABLE data( "id" INTEGER PRIMARY KEY AUTOINCREMENT, "sha" TEXT, "data" BLOB, "length" INTEGER, "compressed" BLOB); CREATE TABLE metadata( "id" INTEGER, "abspath" TEXT, "length" INTEGER, "mtime" TEXT, "ctime" TEXT, "atime" TEXT, "inode" INTEGER); data table metadata table
- 14. seFS API flow $touch abc getattr() create() open() release() $rm abc $cat >> abc getattr() access() getattr() open() flush() release() unlink() create() seFS DB User Operations seFS APIs storage Efficiency write()
- 15. seFS: Code #!/usr/bin/python import fuse import stat import time from seFS import seFS fuse.fuse_python_api = (0, 2) class MyFS(fuse.Fuse): def __init__(self, *args, **kw): fuse.Fuse.__init__(self, *args, *kw) # Set some options required by the # Python FUSE binding. self.flags = 0 self.multithreaded = 0 self.fd = 0 self.sefs = seFS() ret = self.sefs.open('/') self.sefs.write('/', "Root of the seFS") t = int(time.time()) mytime = (t, t, t) ret = self.sefs.utime('/', mytime) self.sefs.setinode('/', 1)
- 16. seFS: Code (1) def getattr(self, path): sefs = seFS() stat = fuse.stat() context = fuse.FuseGetContext() #Root if path == '/': stat.stat_nlink = 2 stat.stat_mode = stat.S_IFDIR | 0755 else: stat.stat_mode = stat.S_IFREG | 0777 stat.stat_nlink = 1 stat.stat_uid, stat.stat_gid = (context ['uid'], context ['gid']) # Search for this path in DB ret = sefs.search(path) # If file exists in DB, get its times if ret is True: tup = sefs.getutime(path) stat.stat_mtime = int(tup[0].strip().split('.')[0]) stat.stat_ctime = int(tup[1].strip().split('.')[0]) stat.stat_atime = int(tup[2].strip().split('.')[0]) stat.stat_ino = int(sefs.getinode(path)) # Get the file size from DB if sefs.getlength(path) is not None: stat.stat_size = int(sefs.getlength(path)) else: stat.stat_size = 0 return stat else: return - errno.ENOENT
- 17. seFS: Code (2) def create(self, path,flags=None,mode=None): sefs = seFS() ret = self.open(path, flags) if ret == -errno.ENOENT: #Create the file in database ret = sefs.open(path) t = int(time.time()) mytime = (t, t, t) ret = sefs.utime(path, mytime) self.fd = len(sefs.ls()) sefs.setinode(path, self.fd) return 0 def write(self, path, data, offset): length = len(data) sefs = seFS() ret = sefs.write(path, data) return length
- 18. seFS: Learning • Design your file system and define the objectives first, before development – skip implementing functionality your file system doesn’t intend to support • Database schema is crucial • Knowledge on FUSE API is essential – FUSE APIs are look-alike to standard POSIX APIs – Limited documentation of FUSE API • Performance?
- 19. Conclusion • Development of FS is very easy with FUSE • Python aids RAD with Python-Fuse bindings • seFS: Thought provoking implementation • Creative applications – your needs and objectives • When are you developing your own File system?! ☺
- 20. Further Read • Sample Fuse based File systems – Sshfs – YoutubeFS – Dedupfs – GlusterFS • Python-Fuse bindings – http://fuse.sourceforge.net/ • Linux internal manual
- 21. Contact Us • Chetan Giridhar – http://technobeans.com – cjgiridhar@gmail.com • Vishal Kanaujia – http://freethreads.wordpress.com – vishalkanaujia@gmail.com
- 22. Backup
- 23. Agenda • The motivation • Intro to *NIX File Systems • Trade off: code in user and kernel space • FUSE? • Hold on – What’s VFS? • Diving into FUSE internals • Design and develop your own File System with Python-FUSE bindings • Lessons learnt • Python-FUSE: Creative applications/ Use-cases
- 24. User-space and Kernel space • Kernel-space – Kernel code including device drivers – Kernel resources (hardware) – Privileged user • User-space – User application runs – Libraries dealing with kernel space – System resources
- 25. Virtual File-system • To support multiple FS in *NIX • VFS is an abstract layer in kernel • Decouples file system implementation from the interface (POSIX API) – Common API serving different file system types • Handles user calls related to file systems. – Implements generic FS actions – Directs request to specific code to handle the request • Associate (and disassociate) devices with instances of the appropriate file system.
- 26. FUSE: Internals • Three major components: – Userspace library (libfuse.*) – Kernel module (fuse.ko) – Mount utility (fusermount) • Kernel module hooks in to VFS – Provides a special device “/dev/fuse” • Can be accessed by a user-space process • Interface: user-space application and fuse kernel module • Read/ writes occur on a file descriptor of /dev/fuse
- 27. FUSE Workflow User space Kernel space User (file I/O) FUSE: kernel lib Custatom File Systatem Virtual File Systatem User-space FUSE lib
- 28. Facts and figures • seFS – online storage efficiency • De-duplication/ compression – Managed catalogue information (file meta-data rarely changes) – Compression encoded information • Quick and easy prototyping (Proof of concept) • Large dataset generation – Data generated on demand
- 29. Creative applications: FUSE based File systems • SSHFS: Provides access to a remote file-system through SSH • WikipediaFS: View and edit Wikipedia articles as if they were real files • GlusterFS: Clustered Distributed Filesystem having capability to scale up to several petabytes. • HDFS: FUSE bindings exist for the open source Hadoop distributed file system • seFS: You know it already ☺