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Jen Rowland, Date: 13 October 2017, 2-4 PM
How to Write an MRes Thesis
MASTER OF RESEARCH – COMMUNICATIONS 700
Today’s Agenda
2
HOW TO WRITE AN MRES THESIS
• Usual Structure – Sections
• General Requirements for Structure
• Section by Section Breakdown
• Variations between Faculties
*Please do ask questions throughout
LITERATURE REVIEW/INTRODUCTION
CONCLUSIONS/FUTURE DIRECTION
BIBLIOGRAPHY/REFERENCES
TITLE PAGE
TABLE OF CONTENTS
ABBREVIATIONS
STATEMENT
SUMMARY/ABSTRACT
AIMS OF STUDY
ACKNOWLEDGEMENTS
APPENDICES
MATERIALS/METHOD
RESULTS
DISCUSSION
Style
FORMATTING AND STYLE OF MANUSCRIPT
Thesis Format – PhD, MPhil and MRes
http://www.hdr.mq.edu.au/information_for/current_candidates/thesis_preparation#presentation
cv
c
v
Double or 1.5
spaced text Double-sided
printing
Medium-weight
paper
High-quality
printing (laser)
BINDINGEDGE
3.5cm margin
on binding
edge 1.5cm
margin
cv
cv 1.5cm
margin
Master of Research Thesis
http://www.hdr.mq.edu.au/information_for/current_candidates/thesis_preparation#Relationship 6
GENERAL REQUIREMENTS
1. Approximately 20,000 words (or 50-55 pages)
2. Title Page, Table of Contents, Summary/Abstract (200
words), Statement, Acknowledgements.
3. Consecutive page numbers
4. Diagrams/Figures should be drawn or printed on A4 paper
and set out on right hand page with legend either at bottom or
on page facing figure.
5. Tables in appropriate place in text, but lengthy/bulky tables in
appendix
6. Large tables/diagrams/maps, should be folded as to read
right-hand page when open.
Preliminary Pages
FRONT PAGES OF THESIS
INTRODUCTION
CONCLUSIONS/FD
REFERENCES
TITLE PAGE
TABLE OF CONTENTS
ABBREVIATIONS
STATEMENT
SUMMARY/ABSTRACT
AIMS OF STUDY
ACKNOWLEDGEMENTS
APPENDICES
MATERIALS/METHOD
RESULTS
DISCUSSION
•Prepages page numbered i, ii, iii, iv…
• not counted in page limit
http://www.mq.edu.au/policy/docs/hdr_thesis/guideline_by_publication.html
TITLE PAGE
• Title of the thesis in full
• Names and degrees of the candidate
• Name of the organisation, institute or laboratory in
which the research was carried out (if applicable)
• Name of the host University Department
• Date when submitted or re-submitted for the degree
• Statement of presentation
• No page number
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Intracellular Signalling of IGFI
Jennifer Rowland
BSc. M.Res
Department of Biological Sciences
Faculty of Science and Engineering
Macquarie University
NSW Australia
Presented for the degree of
Master of Research
On
February 18, 2016
cv
TITLE PAGE
Investigation of the Properties of
Adipose-Derived Cells and Secretions
Sinead Blaber
Bachelor of Biotechnology (Honours)
University of Technology, Sydney
A thesis submitted in partial fulfilment of the requirements for the degree of
Doctor of Philosophy
Department of Chemistry and Biomolecular Sciences,
Macquarie University
Sydney, Australia
Submitted for examination: November 2012
Final Submission: August 2013
Investigation of the Properties of
Adipose-Derived Cells and Secretions
Sinead Blaber
Bachelor of Biotechnology (Honours)
University of Technology, Sydney
A thesis submitted in partial fulfilment of the requirements for the degree of
Doctor of Philosophy
Department of Chemistry and Biomolecular Sciences,
Macquarie University
Sydney, Australia
Submitted for examination: November 2012
Final Submission: August 2013
A thesis submitted in fulfillment of the requirements for the degree of
Master of Research
Macquarie University
Faculty of Medicine and Health Sciences
Department of Biomedical Sciences
October 2016
BSc (Biochemistry)
TABLE OF CONTENTS
• Use a document map/headings to make your table of
contents
• You might want to use Captions to create a separate
table of contents for tables and figures
• Prepages page numbered i, ii, iii, iv…
• Pages numbered 1, 2, 3, 4…
• Sections Numbered 1, 1.1, 1.1.1, 2, 2.1, 2.1.1, 3…
http://hdl.handle.net/1959.14/1256741
TABLE OF CONTENTS
• May be followed by or associated with:
•List of Tables
•Table 1.1
•Table 1.2 ….
•List of Figures
•Figure 1.1
•Figure 1.2
•Figure 2.1 ….
TABLE OF CONTENTS
http://hdl.handle.net/1959.14/1256741http://hdl.handle.net/1959.14/1069798
ABSTRACT/SUMMARY
Approx 200 words (1 page)
Consider breaking it up into the following sections
1: Introduction of field
2: Identification of gap in field
3: Main research findings
4: How the work has contributed to bridging the gap in
knowledge
Smooth flow abstract
17
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Abstract
INTRO
GAP
MAIN STUDY
FINDINGS
CONCLUSIONS
Section headings abstract
18
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Abstract
INTRO
GAP
METHOD
DISCUSSION
RESULTS
Headings
• Introduction
• Methods
• Results
• Discussion
No Headings
• Clear flow
http://hdl.handle.net/1959.14/1256741http://hdl.handle.net/1959.14/1069798
Signposting
20
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Abstract
INTRO
GAP
MAIN STUDY
FINDINGS
CONCLUSIONS
Broad statement of field
To date...
Begin with:
Nonetheless… However…
…, yet, this remains unclear.
End with:
In order to address this…
This is the first report of…
These findings demonstrate…
[X experimental approach]
showed that…
When Y was tested…
STATEMENT OF ORIGINALITY
This thesis is the result of my own work and
includes nothing which is the outcome of work
done in collaboration except where specifically
indicated in the text. This work has not been
submitted for a higher degree to any other
university or institution.
Jennifer Rowland
DECLARATION
I certify that the work in this thesis entitled “Investigation of the
Properties of Adipose-Derived Cells and Secretions” has not
previously been submitted for a degree nor has it been submitted as
part of requirements for a degree to any other university or
institution other than Macquarie University. I also certify that the
thesis is an original piece of research and it has been written by me.
Any help and assistance that I have received in my research work
and the preparation of the thesis itself have been appropriately
acknowledged.
In addition, I certify that all information sources and literature used
are indicated in the thesis.
The research presented in this thesis was approved by the
Macquarie University Human Research Ethics Committee,
reference number:
Human Ethics Approval:
5201100385 – 2011
Biosafety Approval
5201000874 – 2010
Some of the research presented in this thesis (Chapter 4) was
approved by the University of Queensland’s Animal Ethics
Committee. Confirmation of this approval was provided to the
Macquarie University Animal Ethics Committee.
Animal Ethics Approval:
TETRAQ/331/11/REGENEUS – 2011
Sinead Blaber (4217 4686)
30th November, 2012
i
http://hdl.handle.net/1959.14/1256741
DECLARATION
I certify that the work in this thesis entitled “Investigation of the
Properties of Adipose-Derived Cells and Secretions” has not
previously been submitted for a degree nor has it been submitted as
part of requirements for a degree to any other university or
institution other than Macquarie University. I also certify that the
thesis is an original piece of research and it has been written by me.
Any help and assistance that I have received in my research work
and the preparation of the thesis itself have been appropriately
acknowledged.
In addition, I certify that all information sources and literature used
are indicated in the thesis.
The research presented in this thesis was approved by the
Macquarie University Human Research Ethics Committee,
reference number:
Human Ethics Approval:
5201100385 – 2011
Biosafety Approval
5201000874 – 2010
Some of the research presented in this thesis (Chapter 4) was
approved by the University of Queensland’s Animal Ethics
Committee. Confirmation of this approval was provided to the
Macquarie University Animal Ethics Committee.
Animal Ethics Approval:
TETRAQ/331/11/REGENEUS – 2011
Sinead Blaber (4217 4686)
30th November, 2012
i
http://hdl.handle.net/1959.14/1256741
http://hdl.handle.net/1959.14/1256741
STATEMENT OF ORIGINALITY
• Work not submitted elsewhere for a higher
degree
• Indicate that sources of information referenced
• Outline Ethics clearances (with numbers)
http://www.hdr.mq.edu.au/information_for/thesis_examiners/documents/HDR_Thesis_Preparation_Advice_Aug_08.pdf
ACKNOWLEDGEMENTS
• Must acknowledge contributors to your work
•Funding Support
•Supervisors
•Collaborators
•Technical Support
•Colleagues
• Should acknowledge personal supporters
•Friends
•Family
ACKNOWLEDGEMENTS
• Try to group the acknowledgements into paragraphs
“I am immensely grateful to my colleagues in the VTHRC Research
Centre, including: John for assisting with specimen collection, Anna for
helping with formatting, Joseph for securing all my bookings,…..”
• People read your acknowledgements to get a feeling
for who you are as a person, don’t overlook them
• Use exceptional language
Main Body of Thesis
20,000 WORD LIMIT (50-55 PAGES)
INTRODUCTION
CONCLUSIONS/FD
REFERENCES
TITLE PAGE
TABLE OF CONTENTS
ABBREVIATIONS
STATEMENT
SUMMARY/ABSTRACT
AIMS OF STUDY
ACKNOWLEDGEMENTS
APPENDICES
MATERIALS/METHOD
RESULTS
DISCUSSION
•Main pages page numbered 1, 2, 3, 4…
•Counted in page limit
INTRODUCTION
• Provides overview of the research field to date
o History leading to the current study
• May have tables or figures that demonstrate
concepts
o ones you have made
o from articles *referenced*
o modified from articles *referenced*
• Emphasises relevance of the current study
• Should naturally lead to the next section where
you state the overall aims of this thesis work
START BROAD
REFINE FOCUS 3-5 pages
INTRODUCTION
Example Figure from Introduction
http://hdl.handle.net/1959.14/305872
Appetite and
Energy Balance Blood pressure
regulation
Angiogenesis
HemostasisInflammation,
Immunity and acute
phase response
Insulin
sensitivity
Lipid
Metabolism
Figure 1.1 Diverse role of adipose
tissue.
Figure adapted from (6).
Table 2. Statistics of water resources in Australia (FRU, 2016)
1990 2010 2016
Annual Change
Rate
1990-2016
Dammed water Man made na na 2000 na
(42%)
Naturally occurring na na 3200 na
(58%)
Reservoirs Public 4200 3800 na na
Private 5000 5600 na na
Usage rights (all) Public 8000 7200 6000 15%
Private 1000 3000 5000 500%
Home tank users 800 14000 45000 500%
INTRODUCTION
Example Table from Introduction
INTRODUCTION
http://hdl.handle.net/1959.14/1069798
STUDY AIMS
STUDY AIMS
• Simple one-page summary outlining the
main aims of the study overall
• Emphasizes the main research question
• Outlines how you will address the
research question
• Simple reference point for reader
0.5 - 1 page
STUDY AIMS
START BROAD
REFINE FOCUS
• Simple one-page summary outlining the
main aims of the study overall
• Emphasizes the main research question
• Outlines how you will address the
research question
• Simple reference point for reader
0.5 - 1 page
This thesis is focused on
investigating…
In order to address this key
question, the following
approaches were taken…
1: X was
2: Y was
3: This data was transformed
by…
This investigation is presented
in the following chapters.
MATERIALS & METHODS
• Sufficient detail that the reader could repeat the
study
• May include tables or figures that provide concise
information
o Summary of reagents
o Graphic of study approach
o Overview of research approach
• Order of methods reflects order of results
• Simple and clear language, following protocol for
the discipline
APPROACHES
TAKEN
METHODS
http://hdl.handle.net/1959.14/1069798
METHODS
Berliner, 2016
METHODS
http://hdl.handle.net/1959.14/1069798
RESULTS
• Typically 1-2 results chapters
• Usually includes tables and figures that provide
detailed information
o Use Statistics
o Graphic of study approach
o Overview of research approach
• Order of methods reflects order of results
• Simple and clear language, following protocol for
the disciplineRESULTS OF
INVESTIGATION
RESULTS
• Some may be presented in journal article format
where you include
• Short introduction
• Concise method
• Results
• Short discussion
• May be presented in various formats
• Tables
• Figures
• Flow charts
• Pictures/Photos
• Embedded quotes
RESULTS OF
INVESTIGATION
RESULTS
http://hdl.handle.net/1959.14/1069798
RESULTS
http://hdl.handle.net/1959.14/1069798
DISCUSSION
RELEVANCE OF
RESULTS
• Ties together all of the study findings
• Should discuss in same order as results
• Outline the overall major contributions to the field
• Outline the shortfalls and work that might be pursued
further, FUTURE DIRECTIONS
• Employ figures/diagrams to clarify outcomes where
appropriate
DISCUSSION
RELEVANCE OF
RESULTS
Introduce the main findings of the work before explain their relevance
• This study overviews the…
• This thesis describes the first investigation of…
• This work has demonstrated…
Relate the findings to the published literature
The finding of X… related closely to the findings
of Jones et al. (2008).
APPENDICES
• Questionnaires – in full
• Technical details of the work/analysis
• Survey Outlines
• Ethics Approvals
• Safety Approvals
• Detailed protocols/equipment reference info
• NCBI published sequences
• Find exemplars in your field
• Refer to Learning Advisors and Research Librarians
• Practice writing regularly
• Make sure that you keep an up-to-date schedule of the
thesis plan
• Keep focused on research goals
• Have regular project meetings
• Start writing/planning as early as possible
Final Thoughts
REFERENCE MATERIAL
• HDR OFFICE – HDR Thesis Preparation Advice
http://www.hdr.mq.edu.au/information_for/thesis_examiners/documents/HDR_Thesis_Preparation_Advi
ce_Aug_08.pdf
• Code for Responsible Conduct of Research
http://www.mq.edu.au/__data/assets/pdf_file/0019/71065/The20Macquarie20University20Code20for20th
e20Responsible20Conduct20of20Research.pdf
• Thesis by Publication Guideline
http://www.mq.edu.au/policy/docs/hdr_thesis/guideline_by_publication.html
Faculty Recommendations
FOR VARIOUS FACULTIES AT MQ
• Some departments prefer you to submit your thesis in a
journal article.
• Main body of thesis then also incorporates a short
abstract (instead of preliminary pages)
• Referencing is usually Vancouver or Harvard style (specific
to your discipline)
• Appendices should not be more text material. (see
Appendices outline)
Faculty Variation
FOLLOW DEPARTMENTAL GUIDELINES PROVIDED
Today’s Agenda
50
HOW TO WRITE AN MRES THESIS – STAGE 2
• Writing your Literature Review
• Plagiarism
• Basic Writing Rules
• Process Writing
*Please do ask questions throughout
21 July 2016
Writing your Literature Review
THE HARDEST PART
The Literature Review
• Set up a Document Map outlining the sections
• Note the main areas that you want to review
• Structure out what you want to write
• Then begin to enter the main content for each section
• Ensure that you don’t copy and paste material from articles you are reviewing
52
STRUCTURE
Plagiarism
COPYING AND PASTING
How to Write an MRes Thesis
WHAT IS PLAGIARISM?
Early 17th century from Latin
Plagiarius'kidnapper‘
(from plagium 'a kidnapping', from Greek plagion) + -ism.
Oxford Dictionary Online, http://www.oxforddictionaries.com/
“The practice of taking someone else’s work or
ideas and passing them off as one’s own.”
Plagiarism
1: Quoting without acknowledging the source
2: Borrowing ideas, concepts, results and
conclusions. Passing them off as your own without
acknowledging.
3: Summarizing and paraphrasing another’s work
without acknowledging source
Dean HDR Office | Learning Skills Team | Research Office
56
WHAT DOES IT CONSTITUTE?
Plagiarism
1: Quoting without acknowledging the source
2: Borrowing ideas, concepts, results and
conclusions. Passing them off as your own without
acknowledging
3: Summarizing and paraphrasing another’s work
without acknowledging source
Dean HDR Office | Learning Skills Team | Research Office 57
WHAT DOES IT CONSTITUTE?
REFERENCING
SOURCE
IS KEY
Hofman, 2014
Acknowledging Source
You don’t need to reference common knowledge
Dean HDR Office | Learning Skills Team | Research Office 58
HOW CAN YOU ACHIEVE THIS?
Humpback whales migrate along the coast of Australia each year.
Hofman, 2014
You do need to reference:
- Information that is not generally known
- Ideas that interpret facts
Australian east-coast humpback whale migration has changed with
global warming (10).
Acknowledging Source
Dean HDR Office | Learning Skills Team | Research Office 59
HOW CAN YOU ACHIEVE THIS?
Hofmann, 2014
You do need to reference:
- Information that is not generally known
- Ideas that interpret facts
You do need to cite:
- Information and interpretation of others’ work
While low expression of this receptor is common in stem cells, high
expression has been linked to reduced pluripotency (21).
While low expression of this receptor is common in stem cells, high
expression has been linked to reduced pluripotency (Jones et al., 2014).
Acknowledging Source
60
You do need to reference/cite:
- Information that is not generally known
- Ideas that interpret facts
- Information and interpretation of others’ work
“Know that imitation and borrowing themselves are not plagiarism. Drawing on
other people’s ideas is perfectly reasonable and in fact unavoidable when you
write academic documents- but you must acknowledge the source”
Angelika H. Hofmann
Hofmann, 2014
Avoiding Plagiarism,
QUOTING
Quotation
62
QUOTING THE EXACT WORDS OF OTHERS
You do need to quote:
- When you are using the exact words of others
“Know that imitation and borrowing themselves are not plagiarism. Drawing on
other people’s ideas is perfectly reasonable and in fact unavoidable when you
write academic documents- but you must acknowledge the source”
Angelika H. Hofmann
• Limit this to 2-3 lines within a paragraph
• If longer, you need to make a block quote
Hofmann, 2014
Quotation
63
QUOTING THE EXACT WORDS OF OTHERS
This is probably best described by a Harvard group recently as “the best possible chance of potentiating
injury repair in the clinic” (Jones et al., 2015). Nonetheless, several other approaches are being pursued
concurrently, principally focused on viral delivery (Johns et al., 2015).
__________________________________________________________________________________
Many authors have described the potential of ES cells in therapeutic applications, particularly related to
burn treatment. This is probably best summarised by Jones and colleagues (2006), who described this
approach as
“the best possible chance of potentiating injury repair in the clinic. It is currently under
development in our group and has shown promising results. We anticipate conducting
experiments in clinical trials in the near future, as the mouse trials have shown exceptional
outcomes”. Jones et al., 2006
As this work is underway, a number of other groups are turning to viral delivery approaches to specifically
target cell-cycle regulators (Johns et al., 2015)..
Quotation
64
QUOTING THE EXACT WORDS OF OTHERS
This is probably best described by a Harvard group recently as “the best possible chance of
potentiating injury repair in the clinic” (Jones et al., 2015). Nonetheless, several other approaches are
being pursued concurrently, principally focused on viral delivery (Johns et al., 2015).
__________________________________________________________________________________
Many authors have described the potential of ES cells in therapeutic applications, particularly related to
burn treatment. This is probably best summarised by Jones and colleagues (2006), who described this
approach as
“the best possible chance of potentiating injury repair in the clinic. It is currently under
development in our group and has shown promising results. We anticipate conducting
experiments in clinical trials in the near future, as the mouse trials have shown
exceptional outcomes”. (Jones et al., 2006)
As this work is underway, a number of other groups are turning to viral delivery approaches to specifically
target cell-cycle regulators (Johns et al., 2015)..
Paraphrasing
Paraphrasing
66
REPHRASING IDEAS
Delivering the information in your own flow of ideas
- When you include some information, but not all the details of the original
- Must reference the original
• Write notes in bullet points
• Take notes without source visible
• Write the information you wish to reference in your own voice
• Ensure you reference
DON’T JUST USE SYNONYMS or CHANGE WORDS
Paraphrasing
67
REPHRASING IDEAS
• Reference EVERYTHING
• Quote where required
• Paraphrase
Avoiding Plagiarism
SUMMARISING
Summarising
69
REPHRASING IDEAS
1
Johns et al., reported
that these proteins are
expressed in muscle
cells (1).
Read paper, turn over, summarise the ideas in your text.
Grouping Information
70
REPHRASING IDEAS
This protein has been
reported to be
expressed in several
cell types, including:
muscle (1); skin (2);
immune cells (3-5); and
glia (6).
4
5
6
1
2
3
Summarising
71
SUMMARISING THE MATERIAL
• Reference EVERYTHING
• Quote where required
• Paraphrase
• Summarise
Basic Writing Rules
73
#1 General Rule for Academic Writing
K.I.S.S
“Keep it Short and Simple” or “Keep it Simple, Stupid”
CLARITY, READABILITY, and NON-AMBIGUITY
MAKE EVERY WORD COUNT
74
• Never Translate
• Accept total responsibility for being clear
• The worst sin is ambiguity
• Edit carefully
• Trust your ear
• English is not logical
General Advice
FOR NON-NATIVE WRITERS
Process Write
Process Write
76
EDIT YOUR MATERIAL
After you noted down everything in your own words, then you can process the information.
- improves the style
- reduces plagiarism
Rough
Draft
Employ
Key
Words
Include
Signposting
Connectives
Edit
sentences Edit out
useless
words
Edit passive
to active
voice
Improve
Verb ChoiceAdapt to
formal
language
Strengthen
negatives
Ensure verb/subject
agreement
End Focus
Check tense
Employ Key Words
77
CLARIFICATION
Rough
Draft
Employ
Key
Words
Employ Key Words
78
CLARIFICATION
When referring to previously-mentioned items with “this / these / such,”
offer more than just the pronoun:
This…
These…
It…
This molecule…
These two methods…
Such a program…
→
Ambiguous Specific
becomes
Include Signposting Connectives
79
GUIDING THE READER
Rough
Draft
Employ
Key
Words
Include
Signposting
Connectives
Include Signposting Connectives
80
GUIDING THE READER
Signposts, or connectives, tell readers how to receive new information.
“First … second … third . . . ,”
“On the other hand . . . .”
“Considering this from another angle . . . .”
“Similar to the last point is . . . .”
See Linking Words
Edit Sentences
81
EDIT YOUR MATERIAL
Rough
Draft
Employ
Key
Words
Include
Signposting
Connectives
Edit
sentences
Edit Sentences
82
EDIT YOUR MATERIAL
Avoid short, choppy, sentences. Link some together, embed others.
Consider splitting longer run-on sentences to two separate sentences
→
becomes
X costs a lot. You
can’t get it there
often.
Short and choppy
X is expensive and is seldom available there.
Because X is expensive, it is seldom available there.
X, being expensive there, is seldom available
(situation) → (result) = end-focus
Elegant (linked and embedded)
Use shorter sentences for strong statements. “Every mouse died”
Remove redundant words
83
Cut out every word that performs no task
Rough
Draft
Employ
Key
Words
Include
Signposting
Connectives
Edit
sentences Edit out
useless
words
Remove redundant words
84
Cut out every word that performs no task
There is/are X.
X exists.
X occurs.
X appears.
X arises.
X emerges
→
becomes
All
Active
Voice
 Avoid repeating FACTS. Planned repetition of WORDS helps linkage.
 Confusion results from synonym-use. Make yourself clear by choosing one term.
o Do not indulge in overuse of a synonym dictionary (thesaurus).
EG: Method / methodology / procedure / system
Convert Passive to Active Voice
85
Rough
Draft
Employ
Key
Words
Include
Signposting
Connectives
Edit
sentences Edit out
useless
words
Edit passive
to active
voice
Convert Passive to Active Voice
86
Avoid ending sentences with passive verbs
To X, Y was added Y was added to X→
becomes
In Methods, passives can go in the middle of the sentence
Passive constructions can usually include
“by” someone or something.
Convert Passive to Active Voice
87
Change some passive verbs into adjectives
X could be seen.
X was always used.
All two-year-old children were studied.
X was evident/apparent/visible.
X always proved useful.
All children studied were age two.
(Note end-focus in each)
→
becomes
Convert Passive to Active Voice
88
Change the verb itself
Patients were operated on.
Sixty were used as controls.
Each participant was given X.
.
Patients underwent surgery.
Sixty served as controls.
Each participant received X.
(Note end-focus in each)
→
becomes
Convert Passive to Active Voice
89
Omit useless passive constructions
It has been found that X causes Y
(Jones, 2001).
We found that Y was produced by X.
.
Jones (2001) found that X causes Y.
X causes Y (Jones, 2001). *
Y results from X. X leads to Y.
X produced Y. Y was a product of X.
→
becomes
* K.I.S.S.
Convert Passive to Active Voice
90
Use the inanimate agent
a non-human/non-living thing performing an action.
Table 3 shows . . . .
Figure 5 illustrates . . . .
Our results indicate . . . .
Our hypothesis predicts X.
Opinions among us vary.
Upgrade Verbs
91
USE MORE PRECISE VERBS
Rough
Draft
Employ
Key
Words
Include
Signposting
Connectives
Edit
sentences Edit out
useless
words
Edit passive
to active
voice
Improve
Verb
Choice
Upgrade Verbs
92
USE MORE PRECISE VERBS
Be
See
Have
Get
Exist
Observe
Assess
Measure
Determine
Possess
Assess
Confirm
Characterize
→
becomes
For elegance and formality, specify meanings of “get” (“receive?” “become?” “understand?”).
Upgrade most rough-draft common verbs to become more precise verbs
Formalize the language
93
CHANGE FROM COLLOQUIAL
Rough
Draft
Employ
Key
Words
Include
Signposting
Connectives
Edit
sentences Edit out
useless
words
Edit passive
to active
voice
Improve
Verb ChoiceAdapt to
formal
language
Formalize the language
94
CHANGE FROM COLLOQUIAL
if
like
a lot of, lots of, plenty
big
whether (or not)
such as
many, several, large
great
→
becomes
Change colloquial phrases to more formal ones
Avoid “so” - It was SO fast = HOW FAST?
Avoid “too” at the end of a sentence -
He died, too = He also died.
Strengthen Negatives
95
“NOT” IS A WEAK WORD
Rough
Draft
Employ
Key
Words
Include
Signposting
Connectives
Edit
sentences Edit out
useless
words
Edit passive
to active
voice
Improve
Verb ChoiceAdapt to
formal
language
Strengthen
negatives
Strengthen Negatives
96
“NOT” IS A WEAK WORD
• Substitute negatives
• Substitute negative prefixes
• Change to negative verbs or use negative adjectives
Remove NOT in three ways
Strengthen Negatives
97
“NOT” IS A WEAK WORD
Substitute Negatives
→
becomes
Note: Beginning a sentence with a negative is powerful
No
None
Never
Strong
negatives
There was not any X.
Not one patient survived.
They had not seen X before.
Weak
No X existed / appeared.
None of the patients survived.
Never had they seen X before.
Stronger
Strengthen Negatives
98
“NOT” IS A WEAK WORD
Substitute with negative prefixes
→
becomes
un-
in-
im-
non-
dis-
Strong
negatives
The cause is not known.
The text was not coherent.
The task was not possible.
Results were not significant.
This drug isn’t made anymore.
Weak
The cause is / remains unknown.
The text was incoherent.
The task was impossible.
Results were non-significant.
This drug has been discontinued.
Stronger
Strengthen Negatives
99
NOT” IS A WEAK WORD
Change to negative verbs or use negative adjectives
→
becomes
fail
lack
absent
insufficient
incomplete
Strong negatives
The plan did not work.
The solution didn’t have X.
X was not in the samples.
Controls didn’t have enough X.
The test was not finished.
Weak
The plan failed (to succeed).
The solution lacked X.
In the samples, X was absent.
Controls had insufficient X.
The test was incomplete.
Stronger
Match Verbs with Subjects
100
DO VERBS AGREE WITH THEIR SUBJECT IN NUMBER?
Rough
Draft
Employ
Key
Words
Include
Signposting
Connectives
Edit
sentences Edit out
useless
words
Edit passive
to active
voice
Improve
Verb ChoiceAdapt to
formal
language
Strengthen
negatives
Ensure
verb/subject
agreement
Match Verbs with Subjects
101
DO VERBS AGREE WITH THEIR SUBJECT IN NUMBER?
1. Locate every verb (Good sentences have only one or two.)
2. Scan to the left to find its subject (often located far away).
“The actual trigger for these changes in rules that appear to promote the
latest strategy meetings for these departments is/are surprising.”
SUBJECT AND VERB SHOULD BE NEAR EACH
OTHER TO MINIMISE CONFUSION
End Focus
102
MAKE YOUR TEXT FLOW
Rough
Draft
Employ
Key
Words
Include
Signposting
Connectives
Edit
sentences Edit out
useless
words
Edit passive
to active
voice
Improve
Verb ChoiceAdapt to
formal
language
Strengthen
negatives
Ensure
verb/subject
agreement
End Focus
End Focus
103
MAKE YOUR TEXT FLOW
The beginning of a sentence should present its background information.
The end of a sentence is most important: the fresh, new information.
In any sentence, find the most vital word or two—a key adjective, substantive, or a
numerical value of interest. Put a period/full stop after it; it ends the sentence.
Be sure that each sentence ends with words that lead you to the next point,
• creates intra-sentence linkage
• makes the next sentence almost predictable (=flow).
End Focus
104
MAKE YOUR TEXT FLOW
NEWBACKGROUND NEWBACKGROUND
NEWBACKGROUND NEWBACKGROUND
NEWBACKGROUND
Use this technique to string sentences together.
Eventually they will build paragraphs, which form the basis of your scientific writing
End Focus
105
EXERCISE
A to D’s first and second sentences show end-focus with linkage (each italicized). Choose, from
among sentences 1 to 6, the best-linking third sentence for each:
.
A. Australia has the world’s highest incidence of type 1 diabetes. This disabling disease and its treatment
constitute a drain on the state's finances. (continue)
B. The world’s highest incidence of type 1 diabetes occurs in Australia. Australian diabetes researchers now
discover some of the field’s most interesting new data. (continue)
C. Regarding type 1 diabetes, Australia’s annual incidence is the world’s highest.
Its figure for 2008 was 60/100,000. (continue)
D. Australia has the highest incidence of type 1 diabetes in the world. One nation’s
mean incidence in 2008 was actually below 1/100 000, which means that Australia’s
was 60-fold greater, though no one knows why. (continue)
End Focus
106
EXERCISE
1. One important area of investigation is diabetes-associated nephritis.
2. Is sugar consumption unusually high, or is this rate mainly related to genetics?
3. Australia must continue to battle this key medical problem, despite research costs.
4. The Australian government covers medical care and supports those unable to work.
5. Such an incidence requires funding of the country’s top researchers.
6. Patients' longevity is increasing, but what about their quality of life?
Tense
107
ENSURE TENSE USE IS APPROPRIATE
Rough
Draft
Employ
Key
Words
Include
Signposting
Connectives
Edit
sentences Edit out
useless
words
Edit passive
to active
voice
Improve
Verb ChoiceAdapt to
formal
language
Strengthen
negatives
Ensure
verb/subject
agreement
End Focus
Check tense
Tense
108
ENSURE TENSE USE IS APPROPRIATE
Present tense, active voice: “he finds.” Passive: “it is found” (by X)
Past tense, active: “he found.” Passive: “it was found” (by X)
Present perfect active: “she has found.” Passive: “it has been found” (by X)
Past perfect active: “she had found.” Passive: “it had been found” (by X)
Active and passive are the two types of voice.
Tenses are unrelated to voice; tense indicates time.
Tense
109
ENSURE TENSE USE IS APPROPRIATE
PRESENT TENSE PAST TENSE PERFECT FORMS
• These different forms are used throughout different sections of any thesis or
journal article
• More detail on their usage requires more time to address
Final Structural Concerns
110
REVISITING STRUCTURE
NEWBACKGROUND NEWBACKGROUND
NEWBACKGROUND NEWBACKGROUND
NEWBACKGROUND
Each paragraph should have a main focus, you should clarify this at the start.
Final Structural Concerns
111
REVISITING STRUCTURE
NEWBACKGROUND
NEWBACKGROUND
NEWBACKGROUND NEWBACKGROUND
NEWBACKGROUND
Each paragraph should have a main focus, you should clarify this at the start.
TOPIC SENTENCE
TOPIC SENTENCES at the start of paragraph
• clarify what the paragraph is about
• introduce the topic
Final Structural Concerns
112
REVISITING STRUCTURE
NEWBACKGROUND
NEWBACKGROUND
NEWBACKGROUND NEWBACKGROUND
NEWBACKGROUND
Each paragraph should have a clear outcome, that explains the information discussed.
TOPIC SENTENCE
FINAL SENTENCES at the end of paragraph
• clarify what the paragraph introduced
• summarize the topic
FINAL SENTENCE
Summary
113
TIPS AND TRICKS
• Process
Writing
• Structure of the Thesis • Avoiding Plagiarism
• Basic Rules of Writing
• Structuring
Paragraphs
114
Dr Jennifer Rowland
Director of Master of Research Program
Faculty of Medicine and Health Sciences
Email: jen.rowland@mq.edu.au

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How to Write an MRes Thesis

  • 1. Jen Rowland, Date: 13 October 2017, 2-4 PM How to Write an MRes Thesis MASTER OF RESEARCH – COMMUNICATIONS 700
  • 2. Today’s Agenda 2 HOW TO WRITE AN MRES THESIS • Usual Structure – Sections • General Requirements for Structure • Section by Section Breakdown • Variations between Faculties *Please do ask questions throughout
  • 3. LITERATURE REVIEW/INTRODUCTION CONCLUSIONS/FUTURE DIRECTION BIBLIOGRAPHY/REFERENCES TITLE PAGE TABLE OF CONTENTS ABBREVIATIONS STATEMENT SUMMARY/ABSTRACT AIMS OF STUDY ACKNOWLEDGEMENTS APPENDICES MATERIALS/METHOD RESULTS DISCUSSION
  • 5. Thesis Format – PhD, MPhil and MRes http://www.hdr.mq.edu.au/information_for/current_candidates/thesis_preparation#presentation cv c v Double or 1.5 spaced text Double-sided printing Medium-weight paper High-quality printing (laser) BINDINGEDGE 3.5cm margin on binding edge 1.5cm margin cv cv 1.5cm margin
  • 6. Master of Research Thesis http://www.hdr.mq.edu.au/information_for/current_candidates/thesis_preparation#Relationship 6 GENERAL REQUIREMENTS 1. Approximately 20,000 words (or 50-55 pages) 2. Title Page, Table of Contents, Summary/Abstract (200 words), Statement, Acknowledgements. 3. Consecutive page numbers 4. Diagrams/Figures should be drawn or printed on A4 paper and set out on right hand page with legend either at bottom or on page facing figure. 5. Tables in appropriate place in text, but lengthy/bulky tables in appendix 6. Large tables/diagrams/maps, should be folded as to read right-hand page when open.
  • 7. Preliminary Pages FRONT PAGES OF THESIS INTRODUCTION CONCLUSIONS/FD REFERENCES TITLE PAGE TABLE OF CONTENTS ABBREVIATIONS STATEMENT SUMMARY/ABSTRACT AIMS OF STUDY ACKNOWLEDGEMENTS APPENDICES MATERIALS/METHOD RESULTS DISCUSSION •Prepages page numbered i, ii, iii, iv… • not counted in page limit
  • 8. http://www.mq.edu.au/policy/docs/hdr_thesis/guideline_by_publication.html TITLE PAGE • Title of the thesis in full • Names and degrees of the candidate • Name of the organisation, institute or laboratory in which the research was carried out (if applicable) • Name of the host University Department • Date when submitted or re-submitted for the degree • Statement of presentation • No page number
  • 9. cv c v cv Intracellular Signalling of IGFI Jennifer Rowland BSc. M.Res Department of Biological Sciences Faculty of Science and Engineering Macquarie University NSW Australia Presented for the degree of Master of Research On February 18, 2016 cv TITLE PAGE
  • 10. Investigation of the Properties of Adipose-Derived Cells and Secretions Sinead Blaber Bachelor of Biotechnology (Honours) University of Technology, Sydney A thesis submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy Department of Chemistry and Biomolecular Sciences, Macquarie University Sydney, Australia Submitted for examination: November 2012 Final Submission: August 2013
  • 11. Investigation of the Properties of Adipose-Derived Cells and Secretions Sinead Blaber Bachelor of Biotechnology (Honours) University of Technology, Sydney A thesis submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy Department of Chemistry and Biomolecular Sciences, Macquarie University Sydney, Australia Submitted for examination: November 2012 Final Submission: August 2013 A thesis submitted in fulfillment of the requirements for the degree of Master of Research Macquarie University Faculty of Medicine and Health Sciences Department of Biomedical Sciences October 2016 BSc (Biochemistry)
  • 12. TABLE OF CONTENTS • Use a document map/headings to make your table of contents • You might want to use Captions to create a separate table of contents for tables and figures • Prepages page numbered i, ii, iii, iv… • Pages numbered 1, 2, 3, 4… • Sections Numbered 1, 1.1, 1.1.1, 2, 2.1, 2.1.1, 3…
  • 14. TABLE OF CONTENTS • May be followed by or associated with: •List of Tables •Table 1.1 •Table 1.2 …. •List of Figures •Figure 1.1 •Figure 1.2 •Figure 2.1 ….
  • 16. ABSTRACT/SUMMARY Approx 200 words (1 page) Consider breaking it up into the following sections 1: Introduction of field 2: Identification of gap in field 3: Main research findings 4: How the work has contributed to bridging the gap in knowledge
  • 19. Headings • Introduction • Methods • Results • Discussion No Headings • Clear flow http://hdl.handle.net/1959.14/1256741http://hdl.handle.net/1959.14/1069798
  • 20. Signposting 20 cv c v cv cv Abstract INTRO GAP MAIN STUDY FINDINGS CONCLUSIONS Broad statement of field To date... Begin with: Nonetheless… However… …, yet, this remains unclear. End with: In order to address this… This is the first report of… These findings demonstrate… [X experimental approach] showed that… When Y was tested…
  • 21. STATEMENT OF ORIGINALITY This thesis is the result of my own work and includes nothing which is the outcome of work done in collaboration except where specifically indicated in the text. This work has not been submitted for a higher degree to any other university or institution. Jennifer Rowland
  • 22. DECLARATION I certify that the work in this thesis entitled “Investigation of the Properties of Adipose-Derived Cells and Secretions” has not previously been submitted for a degree nor has it been submitted as part of requirements for a degree to any other university or institution other than Macquarie University. I also certify that the thesis is an original piece of research and it has been written by me. Any help and assistance that I have received in my research work and the preparation of the thesis itself have been appropriately acknowledged. In addition, I certify that all information sources and literature used are indicated in the thesis. The research presented in this thesis was approved by the Macquarie University Human Research Ethics Committee, reference number: Human Ethics Approval: 5201100385 – 2011 Biosafety Approval 5201000874 – 2010 Some of the research presented in this thesis (Chapter 4) was approved by the University of Queensland’s Animal Ethics Committee. Confirmation of this approval was provided to the Macquarie University Animal Ethics Committee. Animal Ethics Approval: TETRAQ/331/11/REGENEUS – 2011 Sinead Blaber (4217 4686) 30th November, 2012 i http://hdl.handle.net/1959.14/1256741
  • 23. DECLARATION I certify that the work in this thesis entitled “Investigation of the Properties of Adipose-Derived Cells and Secretions” has not previously been submitted for a degree nor has it been submitted as part of requirements for a degree to any other university or institution other than Macquarie University. I also certify that the thesis is an original piece of research and it has been written by me. Any help and assistance that I have received in my research work and the preparation of the thesis itself have been appropriately acknowledged. In addition, I certify that all information sources and literature used are indicated in the thesis. The research presented in this thesis was approved by the Macquarie University Human Research Ethics Committee, reference number: Human Ethics Approval: 5201100385 – 2011 Biosafety Approval 5201000874 – 2010 Some of the research presented in this thesis (Chapter 4) was approved by the University of Queensland’s Animal Ethics Committee. Confirmation of this approval was provided to the Macquarie University Animal Ethics Committee. Animal Ethics Approval: TETRAQ/331/11/REGENEUS – 2011 Sinead Blaber (4217 4686) 30th November, 2012 i http://hdl.handle.net/1959.14/1256741
  • 25. STATEMENT OF ORIGINALITY • Work not submitted elsewhere for a higher degree • Indicate that sources of information referenced • Outline Ethics clearances (with numbers) http://www.hdr.mq.edu.au/information_for/thesis_examiners/documents/HDR_Thesis_Preparation_Advice_Aug_08.pdf
  • 26. ACKNOWLEDGEMENTS • Must acknowledge contributors to your work •Funding Support •Supervisors •Collaborators •Technical Support •Colleagues • Should acknowledge personal supporters •Friends •Family
  • 27. ACKNOWLEDGEMENTS • Try to group the acknowledgements into paragraphs “I am immensely grateful to my colleagues in the VTHRC Research Centre, including: John for assisting with specimen collection, Anna for helping with formatting, Joseph for securing all my bookings,…..” • People read your acknowledgements to get a feeling for who you are as a person, don’t overlook them • Use exceptional language
  • 28. Main Body of Thesis 20,000 WORD LIMIT (50-55 PAGES) INTRODUCTION CONCLUSIONS/FD REFERENCES TITLE PAGE TABLE OF CONTENTS ABBREVIATIONS STATEMENT SUMMARY/ABSTRACT AIMS OF STUDY ACKNOWLEDGEMENTS APPENDICES MATERIALS/METHOD RESULTS DISCUSSION •Main pages page numbered 1, 2, 3, 4… •Counted in page limit
  • 29. INTRODUCTION • Provides overview of the research field to date o History leading to the current study • May have tables or figures that demonstrate concepts o ones you have made o from articles *referenced* o modified from articles *referenced* • Emphasises relevance of the current study • Should naturally lead to the next section where you state the overall aims of this thesis work START BROAD REFINE FOCUS 3-5 pages
  • 30. INTRODUCTION Example Figure from Introduction http://hdl.handle.net/1959.14/305872 Appetite and Energy Balance Blood pressure regulation Angiogenesis HemostasisInflammation, Immunity and acute phase response Insulin sensitivity Lipid Metabolism Figure 1.1 Diverse role of adipose tissue. Figure adapted from (6).
  • 31. Table 2. Statistics of water resources in Australia (FRU, 2016) 1990 2010 2016 Annual Change Rate 1990-2016 Dammed water Man made na na 2000 na (42%) Naturally occurring na na 3200 na (58%) Reservoirs Public 4200 3800 na na Private 5000 5600 na na Usage rights (all) Public 8000 7200 6000 15% Private 1000 3000 5000 500% Home tank users 800 14000 45000 500% INTRODUCTION Example Table from Introduction
  • 33. STUDY AIMS STUDY AIMS • Simple one-page summary outlining the main aims of the study overall • Emphasizes the main research question • Outlines how you will address the research question • Simple reference point for reader 0.5 - 1 page
  • 34. STUDY AIMS START BROAD REFINE FOCUS • Simple one-page summary outlining the main aims of the study overall • Emphasizes the main research question • Outlines how you will address the research question • Simple reference point for reader 0.5 - 1 page This thesis is focused on investigating… In order to address this key question, the following approaches were taken… 1: X was 2: Y was 3: This data was transformed by… This investigation is presented in the following chapters.
  • 35. MATERIALS & METHODS • Sufficient detail that the reader could repeat the study • May include tables or figures that provide concise information o Summary of reagents o Graphic of study approach o Overview of research approach • Order of methods reflects order of results • Simple and clear language, following protocol for the discipline APPROACHES TAKEN
  • 39. RESULTS • Typically 1-2 results chapters • Usually includes tables and figures that provide detailed information o Use Statistics o Graphic of study approach o Overview of research approach • Order of methods reflects order of results • Simple and clear language, following protocol for the disciplineRESULTS OF INVESTIGATION
  • 40. RESULTS • Some may be presented in journal article format where you include • Short introduction • Concise method • Results • Short discussion • May be presented in various formats • Tables • Figures • Flow charts • Pictures/Photos • Embedded quotes RESULTS OF INVESTIGATION
  • 43. DISCUSSION RELEVANCE OF RESULTS • Ties together all of the study findings • Should discuss in same order as results • Outline the overall major contributions to the field • Outline the shortfalls and work that might be pursued further, FUTURE DIRECTIONS • Employ figures/diagrams to clarify outcomes where appropriate
  • 44. DISCUSSION RELEVANCE OF RESULTS Introduce the main findings of the work before explain their relevance • This study overviews the… • This thesis describes the first investigation of… • This work has demonstrated… Relate the findings to the published literature The finding of X… related closely to the findings of Jones et al. (2008).
  • 45. APPENDICES • Questionnaires – in full • Technical details of the work/analysis • Survey Outlines • Ethics Approvals • Safety Approvals • Detailed protocols/equipment reference info • NCBI published sequences
  • 46. • Find exemplars in your field • Refer to Learning Advisors and Research Librarians • Practice writing regularly • Make sure that you keep an up-to-date schedule of the thesis plan • Keep focused on research goals • Have regular project meetings • Start writing/planning as early as possible Final Thoughts
  • 47. REFERENCE MATERIAL • HDR OFFICE – HDR Thesis Preparation Advice http://www.hdr.mq.edu.au/information_for/thesis_examiners/documents/HDR_Thesis_Preparation_Advi ce_Aug_08.pdf • Code for Responsible Conduct of Research http://www.mq.edu.au/__data/assets/pdf_file/0019/71065/The20Macquarie20University20Code20for20th e20Responsible20Conduct20of20Research.pdf • Thesis by Publication Guideline http://www.mq.edu.au/policy/docs/hdr_thesis/guideline_by_publication.html
  • 49. • Some departments prefer you to submit your thesis in a journal article. • Main body of thesis then also incorporates a short abstract (instead of preliminary pages) • Referencing is usually Vancouver or Harvard style (specific to your discipline) • Appendices should not be more text material. (see Appendices outline) Faculty Variation FOLLOW DEPARTMENTAL GUIDELINES PROVIDED
  • 50. Today’s Agenda 50 HOW TO WRITE AN MRES THESIS – STAGE 2 • Writing your Literature Review • Plagiarism • Basic Writing Rules • Process Writing *Please do ask questions throughout
  • 51. 21 July 2016 Writing your Literature Review THE HARDEST PART
  • 52. The Literature Review • Set up a Document Map outlining the sections • Note the main areas that you want to review • Structure out what you want to write • Then begin to enter the main content for each section • Ensure that you don’t copy and paste material from articles you are reviewing 52 STRUCTURE
  • 55. WHAT IS PLAGIARISM? Early 17th century from Latin Plagiarius'kidnapper‘ (from plagium 'a kidnapping', from Greek plagion) + -ism. Oxford Dictionary Online, http://www.oxforddictionaries.com/ “The practice of taking someone else’s work or ideas and passing them off as one’s own.”
  • 56. Plagiarism 1: Quoting without acknowledging the source 2: Borrowing ideas, concepts, results and conclusions. Passing them off as your own without acknowledging. 3: Summarizing and paraphrasing another’s work without acknowledging source Dean HDR Office | Learning Skills Team | Research Office 56 WHAT DOES IT CONSTITUTE?
  • 57. Plagiarism 1: Quoting without acknowledging the source 2: Borrowing ideas, concepts, results and conclusions. Passing them off as your own without acknowledging 3: Summarizing and paraphrasing another’s work without acknowledging source Dean HDR Office | Learning Skills Team | Research Office 57 WHAT DOES IT CONSTITUTE? REFERENCING SOURCE IS KEY Hofman, 2014
  • 58. Acknowledging Source You don’t need to reference common knowledge Dean HDR Office | Learning Skills Team | Research Office 58 HOW CAN YOU ACHIEVE THIS? Humpback whales migrate along the coast of Australia each year. Hofman, 2014 You do need to reference: - Information that is not generally known - Ideas that interpret facts Australian east-coast humpback whale migration has changed with global warming (10).
  • 59. Acknowledging Source Dean HDR Office | Learning Skills Team | Research Office 59 HOW CAN YOU ACHIEVE THIS? Hofmann, 2014 You do need to reference: - Information that is not generally known - Ideas that interpret facts You do need to cite: - Information and interpretation of others’ work While low expression of this receptor is common in stem cells, high expression has been linked to reduced pluripotency (21). While low expression of this receptor is common in stem cells, high expression has been linked to reduced pluripotency (Jones et al., 2014).
  • 60. Acknowledging Source 60 You do need to reference/cite: - Information that is not generally known - Ideas that interpret facts - Information and interpretation of others’ work “Know that imitation and borrowing themselves are not plagiarism. Drawing on other people’s ideas is perfectly reasonable and in fact unavoidable when you write academic documents- but you must acknowledge the source” Angelika H. Hofmann Hofmann, 2014
  • 62. Quotation 62 QUOTING THE EXACT WORDS OF OTHERS You do need to quote: - When you are using the exact words of others “Know that imitation and borrowing themselves are not plagiarism. Drawing on other people’s ideas is perfectly reasonable and in fact unavoidable when you write academic documents- but you must acknowledge the source” Angelika H. Hofmann • Limit this to 2-3 lines within a paragraph • If longer, you need to make a block quote Hofmann, 2014
  • 63. Quotation 63 QUOTING THE EXACT WORDS OF OTHERS This is probably best described by a Harvard group recently as “the best possible chance of potentiating injury repair in the clinic” (Jones et al., 2015). Nonetheless, several other approaches are being pursued concurrently, principally focused on viral delivery (Johns et al., 2015). __________________________________________________________________________________ Many authors have described the potential of ES cells in therapeutic applications, particularly related to burn treatment. This is probably best summarised by Jones and colleagues (2006), who described this approach as “the best possible chance of potentiating injury repair in the clinic. It is currently under development in our group and has shown promising results. We anticipate conducting experiments in clinical trials in the near future, as the mouse trials have shown exceptional outcomes”. Jones et al., 2006 As this work is underway, a number of other groups are turning to viral delivery approaches to specifically target cell-cycle regulators (Johns et al., 2015)..
  • 64. Quotation 64 QUOTING THE EXACT WORDS OF OTHERS This is probably best described by a Harvard group recently as “the best possible chance of potentiating injury repair in the clinic” (Jones et al., 2015). Nonetheless, several other approaches are being pursued concurrently, principally focused on viral delivery (Johns et al., 2015). __________________________________________________________________________________ Many authors have described the potential of ES cells in therapeutic applications, particularly related to burn treatment. This is probably best summarised by Jones and colleagues (2006), who described this approach as “the best possible chance of potentiating injury repair in the clinic. It is currently under development in our group and has shown promising results. We anticipate conducting experiments in clinical trials in the near future, as the mouse trials have shown exceptional outcomes”. (Jones et al., 2006) As this work is underway, a number of other groups are turning to viral delivery approaches to specifically target cell-cycle regulators (Johns et al., 2015)..
  • 66. Paraphrasing 66 REPHRASING IDEAS Delivering the information in your own flow of ideas - When you include some information, but not all the details of the original - Must reference the original • Write notes in bullet points • Take notes without source visible • Write the information you wish to reference in your own voice • Ensure you reference DON’T JUST USE SYNONYMS or CHANGE WORDS
  • 67. Paraphrasing 67 REPHRASING IDEAS • Reference EVERYTHING • Quote where required • Paraphrase
  • 69. Summarising 69 REPHRASING IDEAS 1 Johns et al., reported that these proteins are expressed in muscle cells (1). Read paper, turn over, summarise the ideas in your text.
  • 70. Grouping Information 70 REPHRASING IDEAS This protein has been reported to be expressed in several cell types, including: muscle (1); skin (2); immune cells (3-5); and glia (6). 4 5 6 1 2 3
  • 71. Summarising 71 SUMMARISING THE MATERIAL • Reference EVERYTHING • Quote where required • Paraphrase • Summarise
  • 73. 73 #1 General Rule for Academic Writing K.I.S.S “Keep it Short and Simple” or “Keep it Simple, Stupid” CLARITY, READABILITY, and NON-AMBIGUITY MAKE EVERY WORD COUNT
  • 74. 74 • Never Translate • Accept total responsibility for being clear • The worst sin is ambiguity • Edit carefully • Trust your ear • English is not logical General Advice FOR NON-NATIVE WRITERS
  • 76. Process Write 76 EDIT YOUR MATERIAL After you noted down everything in your own words, then you can process the information. - improves the style - reduces plagiarism Rough Draft Employ Key Words Include Signposting Connectives Edit sentences Edit out useless words Edit passive to active voice Improve Verb ChoiceAdapt to formal language Strengthen negatives Ensure verb/subject agreement End Focus Check tense
  • 78. Employ Key Words 78 CLARIFICATION When referring to previously-mentioned items with “this / these / such,” offer more than just the pronoun: This… These… It… This molecule… These two methods… Such a program… → Ambiguous Specific becomes
  • 79. Include Signposting Connectives 79 GUIDING THE READER Rough Draft Employ Key Words Include Signposting Connectives
  • 80. Include Signposting Connectives 80 GUIDING THE READER Signposts, or connectives, tell readers how to receive new information. “First … second … third . . . ,” “On the other hand . . . .” “Considering this from another angle . . . .” “Similar to the last point is . . . .” See Linking Words
  • 81. Edit Sentences 81 EDIT YOUR MATERIAL Rough Draft Employ Key Words Include Signposting Connectives Edit sentences
  • 82. Edit Sentences 82 EDIT YOUR MATERIAL Avoid short, choppy, sentences. Link some together, embed others. Consider splitting longer run-on sentences to two separate sentences → becomes X costs a lot. You can’t get it there often. Short and choppy X is expensive and is seldom available there. Because X is expensive, it is seldom available there. X, being expensive there, is seldom available (situation) → (result) = end-focus Elegant (linked and embedded) Use shorter sentences for strong statements. “Every mouse died”
  • 83. Remove redundant words 83 Cut out every word that performs no task Rough Draft Employ Key Words Include Signposting Connectives Edit sentences Edit out useless words
  • 84. Remove redundant words 84 Cut out every word that performs no task There is/are X. X exists. X occurs. X appears. X arises. X emerges → becomes All Active Voice  Avoid repeating FACTS. Planned repetition of WORDS helps linkage.  Confusion results from synonym-use. Make yourself clear by choosing one term. o Do not indulge in overuse of a synonym dictionary (thesaurus). EG: Method / methodology / procedure / system
  • 85. Convert Passive to Active Voice 85 Rough Draft Employ Key Words Include Signposting Connectives Edit sentences Edit out useless words Edit passive to active voice
  • 86. Convert Passive to Active Voice 86 Avoid ending sentences with passive verbs To X, Y was added Y was added to X→ becomes In Methods, passives can go in the middle of the sentence Passive constructions can usually include “by” someone or something.
  • 87. Convert Passive to Active Voice 87 Change some passive verbs into adjectives X could be seen. X was always used. All two-year-old children were studied. X was evident/apparent/visible. X always proved useful. All children studied were age two. (Note end-focus in each) → becomes
  • 88. Convert Passive to Active Voice 88 Change the verb itself Patients were operated on. Sixty were used as controls. Each participant was given X. . Patients underwent surgery. Sixty served as controls. Each participant received X. (Note end-focus in each) → becomes
  • 89. Convert Passive to Active Voice 89 Omit useless passive constructions It has been found that X causes Y (Jones, 2001). We found that Y was produced by X. . Jones (2001) found that X causes Y. X causes Y (Jones, 2001). * Y results from X. X leads to Y. X produced Y. Y was a product of X. → becomes * K.I.S.S.
  • 90. Convert Passive to Active Voice 90 Use the inanimate agent a non-human/non-living thing performing an action. Table 3 shows . . . . Figure 5 illustrates . . . . Our results indicate . . . . Our hypothesis predicts X. Opinions among us vary.
  • 91. Upgrade Verbs 91 USE MORE PRECISE VERBS Rough Draft Employ Key Words Include Signposting Connectives Edit sentences Edit out useless words Edit passive to active voice Improve Verb Choice
  • 92. Upgrade Verbs 92 USE MORE PRECISE VERBS Be See Have Get Exist Observe Assess Measure Determine Possess Assess Confirm Characterize → becomes For elegance and formality, specify meanings of “get” (“receive?” “become?” “understand?”). Upgrade most rough-draft common verbs to become more precise verbs
  • 93. Formalize the language 93 CHANGE FROM COLLOQUIAL Rough Draft Employ Key Words Include Signposting Connectives Edit sentences Edit out useless words Edit passive to active voice Improve Verb ChoiceAdapt to formal language
  • 94. Formalize the language 94 CHANGE FROM COLLOQUIAL if like a lot of, lots of, plenty big whether (or not) such as many, several, large great → becomes Change colloquial phrases to more formal ones Avoid “so” - It was SO fast = HOW FAST? Avoid “too” at the end of a sentence - He died, too = He also died.
  • 95. Strengthen Negatives 95 “NOT” IS A WEAK WORD Rough Draft Employ Key Words Include Signposting Connectives Edit sentences Edit out useless words Edit passive to active voice Improve Verb ChoiceAdapt to formal language Strengthen negatives
  • 96. Strengthen Negatives 96 “NOT” IS A WEAK WORD • Substitute negatives • Substitute negative prefixes • Change to negative verbs or use negative adjectives Remove NOT in three ways
  • 97. Strengthen Negatives 97 “NOT” IS A WEAK WORD Substitute Negatives → becomes Note: Beginning a sentence with a negative is powerful No None Never Strong negatives There was not any X. Not one patient survived. They had not seen X before. Weak No X existed / appeared. None of the patients survived. Never had they seen X before. Stronger
  • 98. Strengthen Negatives 98 “NOT” IS A WEAK WORD Substitute with negative prefixes → becomes un- in- im- non- dis- Strong negatives The cause is not known. The text was not coherent. The task was not possible. Results were not significant. This drug isn’t made anymore. Weak The cause is / remains unknown. The text was incoherent. The task was impossible. Results were non-significant. This drug has been discontinued. Stronger
  • 99. Strengthen Negatives 99 NOT” IS A WEAK WORD Change to negative verbs or use negative adjectives → becomes fail lack absent insufficient incomplete Strong negatives The plan did not work. The solution didn’t have X. X was not in the samples. Controls didn’t have enough X. The test was not finished. Weak The plan failed (to succeed). The solution lacked X. In the samples, X was absent. Controls had insufficient X. The test was incomplete. Stronger
  • 100. Match Verbs with Subjects 100 DO VERBS AGREE WITH THEIR SUBJECT IN NUMBER? Rough Draft Employ Key Words Include Signposting Connectives Edit sentences Edit out useless words Edit passive to active voice Improve Verb ChoiceAdapt to formal language Strengthen negatives Ensure verb/subject agreement
  • 101. Match Verbs with Subjects 101 DO VERBS AGREE WITH THEIR SUBJECT IN NUMBER? 1. Locate every verb (Good sentences have only one or two.) 2. Scan to the left to find its subject (often located far away). “The actual trigger for these changes in rules that appear to promote the latest strategy meetings for these departments is/are surprising.” SUBJECT AND VERB SHOULD BE NEAR EACH OTHER TO MINIMISE CONFUSION
  • 102. End Focus 102 MAKE YOUR TEXT FLOW Rough Draft Employ Key Words Include Signposting Connectives Edit sentences Edit out useless words Edit passive to active voice Improve Verb ChoiceAdapt to formal language Strengthen negatives Ensure verb/subject agreement End Focus
  • 103. End Focus 103 MAKE YOUR TEXT FLOW The beginning of a sentence should present its background information. The end of a sentence is most important: the fresh, new information. In any sentence, find the most vital word or two—a key adjective, substantive, or a numerical value of interest. Put a period/full stop after it; it ends the sentence. Be sure that each sentence ends with words that lead you to the next point, • creates intra-sentence linkage • makes the next sentence almost predictable (=flow).
  • 104. End Focus 104 MAKE YOUR TEXT FLOW NEWBACKGROUND NEWBACKGROUND NEWBACKGROUND NEWBACKGROUND NEWBACKGROUND Use this technique to string sentences together. Eventually they will build paragraphs, which form the basis of your scientific writing
  • 105. End Focus 105 EXERCISE A to D’s first and second sentences show end-focus with linkage (each italicized). Choose, from among sentences 1 to 6, the best-linking third sentence for each: . A. Australia has the world’s highest incidence of type 1 diabetes. This disabling disease and its treatment constitute a drain on the state's finances. (continue) B. The world’s highest incidence of type 1 diabetes occurs in Australia. Australian diabetes researchers now discover some of the field’s most interesting new data. (continue) C. Regarding type 1 diabetes, Australia’s annual incidence is the world’s highest. Its figure for 2008 was 60/100,000. (continue) D. Australia has the highest incidence of type 1 diabetes in the world. One nation’s mean incidence in 2008 was actually below 1/100 000, which means that Australia’s was 60-fold greater, though no one knows why. (continue)
  • 106. End Focus 106 EXERCISE 1. One important area of investigation is diabetes-associated nephritis. 2. Is sugar consumption unusually high, or is this rate mainly related to genetics? 3. Australia must continue to battle this key medical problem, despite research costs. 4. The Australian government covers medical care and supports those unable to work. 5. Such an incidence requires funding of the country’s top researchers. 6. Patients' longevity is increasing, but what about their quality of life?
  • 107. Tense 107 ENSURE TENSE USE IS APPROPRIATE Rough Draft Employ Key Words Include Signposting Connectives Edit sentences Edit out useless words Edit passive to active voice Improve Verb ChoiceAdapt to formal language Strengthen negatives Ensure verb/subject agreement End Focus Check tense
  • 108. Tense 108 ENSURE TENSE USE IS APPROPRIATE Present tense, active voice: “he finds.” Passive: “it is found” (by X) Past tense, active: “he found.” Passive: “it was found” (by X) Present perfect active: “she has found.” Passive: “it has been found” (by X) Past perfect active: “she had found.” Passive: “it had been found” (by X) Active and passive are the two types of voice. Tenses are unrelated to voice; tense indicates time.
  • 109. Tense 109 ENSURE TENSE USE IS APPROPRIATE PRESENT TENSE PAST TENSE PERFECT FORMS • These different forms are used throughout different sections of any thesis or journal article • More detail on their usage requires more time to address
  • 110. Final Structural Concerns 110 REVISITING STRUCTURE NEWBACKGROUND NEWBACKGROUND NEWBACKGROUND NEWBACKGROUND NEWBACKGROUND Each paragraph should have a main focus, you should clarify this at the start.
  • 111. Final Structural Concerns 111 REVISITING STRUCTURE NEWBACKGROUND NEWBACKGROUND NEWBACKGROUND NEWBACKGROUND NEWBACKGROUND Each paragraph should have a main focus, you should clarify this at the start. TOPIC SENTENCE TOPIC SENTENCES at the start of paragraph • clarify what the paragraph is about • introduce the topic
  • 112. Final Structural Concerns 112 REVISITING STRUCTURE NEWBACKGROUND NEWBACKGROUND NEWBACKGROUND NEWBACKGROUND NEWBACKGROUND Each paragraph should have a clear outcome, that explains the information discussed. TOPIC SENTENCE FINAL SENTENCES at the end of paragraph • clarify what the paragraph introduced • summarize the topic FINAL SENTENCE
  • 113. Summary 113 TIPS AND TRICKS • Process Writing • Structure of the Thesis • Avoiding Plagiarism • Basic Rules of Writing • Structuring Paragraphs
  • 114. 114 Dr Jennifer Rowland Director of Master of Research Program Faculty of Medicine and Health Sciences Email: jen.rowland@mq.edu.au