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 What is R?
                                                                                         R’s Advantages
                                                                                         R’s Disadvantages
                                                                                         Installing and Maintaining R
                                                                                         Ways of Running R
Bob Muenchen, Author R for SAS and SPSS Users,
                                                                                         An Example Program
         Co-Author R for Stata Users
                                                                                         Where to Learn More
 muenchen.bob@gmail.com, http://r4stats.com




            Copyright © 2010, 2011, Robert A Muenchen. All rights reserved.                                                             2




                                                                                   “The most powerful statistical computing language
                                                                                      on the planet.” -Norman Nie, Developer of SPSS
                                                                                     Language + package + environment for
                                                                                      graphics and data analysis
                                                                                     Free and open source
                                                                                     Created by Ross Ihaka & Robert Gentleman 1996
                                                                                      & extended by many more
                                                                                     An implementation of the S language by
                                                                                      John Chambers and others
                                                                                     R has 4,950 add-ons, or nearly 100,000 procs


                                                                              3                                                         4
5                Source: r4stats.com/popularity
                                                                                                      6
                    http://r4stats.com/popularity




1.   Data input & management (data step)                * SAS Approach;
2.   Analytics & graphics procedures (proc step)        DATA A; SET A;
3.   Macro language                                       logX = log(X);
4.   Matrix language                                    PROC REG;
5.   Output management systems (ODS/OMS)                  MODEL Y = logX;

R integrates these all seamlessly.                      # R Approach
                                                        lm( Y ~ log(X) )

                                                    7                                                 8
 Vast selection of analytics & graphics
 New methods are available sooner
 Many packages can run R (SAS, SPSS, Excel…)
 Its object orientation “does the right thing”
 Its language is powerful & fully integrated
 Procedures you write are on an equal footing
 It is the universal language of data analysis
 It runs on any computer
 Being open source, you can study and modify it
 It is free

                                                          9                                                             10




* Using SAS;                                                    Language is somewhat harder to learn
PROC TTEST DATA=classroom;                                      Help files are sparse & complex
CLASS gender;                                                   Must find R and its add-ons yourself
VAR score;
                                                                Graphical user interfaces not as polished
                                                                Most R functions hold data in main memory
# In R
                                                                  Rule-of-thumb: 10 million values per gigabyte
t.test(score ~ gender, data=classroom)
                                                                  SAS/SPSS: billions of records
                                                                  Several efforts underway to break R’s memory limit
t.test(posttest, pretest , paired=TRUE, data=classroom)            including Revolution Analytics’ distribution


                                                          11                                                            12
 Base R plus Recommended Packages like:                        Email support is free, quick, 24-hours:
      Base SAS, SAS/STAT, SAS/GRAPH, SAS/IML Studio              www.r-project.org/mail.html
      SPSS Stat. Base, SPSS Stat. Advanced, Regression           Stackoverflow.com
 Tested via extensive validation programs                        Quora.com
 But add-on packages written by…                                 Crossvalidated stats.stackexchange.com
      Professor who invented the method?                          /questions/tagged/r
      A student interpreting the method?                       Phone support available commercially




                                                          13                                                14




1. Go to cran.r-project.org,                                    Comprehensive R Archive Network
   the Comprehensive R Archive Network
                                                                Crantastic.com
2. Download binaries for Base & run                             Inside-R.org
3. Add-ons:                                                     R4Stats.com
   install.packages(“myPackage”)
4. To update: update.packages()




                                                  15                                                        16
17   18




19   20
 Run code interactively
      Submit code from Excel, SAS, SPSS,…
      Point-n-click using
       Graphical User Interfaces (GUIs)
      Batch mode




21
                                             22




23
                                             24
Copyright © 2010, 2011, Robert A Muenchen. All rights reserved.        26
                               25




run ExportDataSetToR("mydata");     GET FILE=‘mydata.sav’.
                                    BEGIN PROGRAM R.
submit/r;
                                    mydata <- spssdata.GetDataFromSPSS(
   mydata$workshop <-
                                      variables = c("workshop gender
     factor(mydata$workshop)
                                      q1 to q4"),
   summary(mydata)                    missingValueToNA = TRUE,
endsubmit;                            row.label = "id" )
                                    summary(mydata)
                                    END PROGRAM.

                               27                                                                               28
29   30




          32
31
34
                                              33




 A company focused on R development & support
 Run by SPSS founder Norman Nie
 Their enhanced distribution of R:
  Revolution R Enterprise
 Free for colleges and universities, including for
  outside consulting




                                                      35
Intro to R for SAS and SPSS User Webinar
43   44
mydata <- read.csv("mydata.csv")                                      > mydata <- read.csv("mydata.csv")
 print(mydata)                                                         > print(mydata)
                                                                          workshop gender q1 q2 q3 q4
 mydata$workshop <- factor(mydata$workshop)
                                                                       1        1      f 1 1 5 1
 summary(mydata)
                                                                       2        2      f 2 1 4 1
 plot( mydata$q1, mydata$q4 )                                          3        1      f 2 2 4 3
                                                                       4        2   <NA> 3 1 NA 3
 myModel <- lm( q4~q1+q2+q3, data=mydata )                             5        1      m 4 5 2 4
 summary( myModel )                                                    6        2      m 5 4 5 5
 anova( myModel )                                                      7        1      m 5 3 4 4
 plot( myModel )
                                                                       8        2      m 4 5 5 5
                                                                  45                                        46




> mydata$workshop <-factor(mydata$workshop)
> summary(mydata)
 workshop       gender
 1:4        f      :3
 2:4        m      :4
            NA's:1
q1                  q2             q3              q4
Min.   :1.00        Min.   :1.00   Min.   :2.000   Min.   :1.00
1st Qu.:2.00        1st Qu.:1.00   1st Qu.:4.000   1st Qu.:2.50
Median :3.50        Median :2.50   Median :4.000   Median :3.50
Mean   :3.25        Mean   :2.75   Mean   :4.143   Mean   :3.25
3rd Qu.:4.25        3rd Qu.:4.25   3rd Qu.:5.000   3rd Qu.:4.25
Max.   :5.00        Max.   :5.00   Max.   :5.000   Max.   :5.00
                                   NA's   :1.000
                                                                  47                                        48
> myModel <- lm(q4 ~ q1+q2+q3, data=mydata)
> summary(myModel)

Call:
lm(formula = q4 ~ q1 + q2 + q3, data = mydata)
Residuals:
      1       2       3       5       6        7      8
-0.3113 -0.4261 0.9428 -0.1797 0.0765 0.0225 -0.1246
Coefficients:
            Estimate Std. Error t value Pr(>|t|)
(Intercept) -1.3243      1.2877 -1.028     0.379
q1            0.4297     0.2623   1.638    0.200
q2            0.6310     0.2503   2.521    0.086
q3            0.3150     0.2557   1.232    0.306
Multiple R-squared: 0.9299,     Adjusted R-squared: 0.8598
F-statistic: 13.27 on 3 and 3 DF, p-value: 0.03084


                                                             49   Copyright © 2010, 2011, Robert A Muenchen. All rights reserved.   50




                                                             51                                                                     52
 R for SAS and SPSS Users, Muenchen
                                                          R for Stata Users, Muenchen & Hilbe
                                                          R Through Excel: A Spreadsheet Interface for Statistics,
                                                           Data Analysis, and Graphics, Heiberger & Neuwirth
                                                          Data Mining with Rattle and R: The Art of Excavating
                                                           Data for Knowledge Discovery, Williams




                                                    53                                                                54




 R is powerful, extensible, free
 Download it from CRAN
 Academics download Revolution R Enterprise
  for free at www.revolutionanalytics.com
 You run it many ways & from many packages
                                                                              muenchen@utk.edu
 Several graphical user interfaces are available
 R's programming language is the way                                   Slides: r4stats.com/misc/webinar
                                                                         Presentation: bit.ly/R-sas-spss
  to access its full power


                                                    55

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Intro to R for SAS and SPSS User Webinar

  • 1.  What is R?  R’s Advantages  R’s Disadvantages  Installing and Maintaining R  Ways of Running R Bob Muenchen, Author R for SAS and SPSS Users,  An Example Program Co-Author R for Stata Users  Where to Learn More muenchen.bob@gmail.com, http://r4stats.com Copyright © 2010, 2011, Robert A Muenchen. All rights reserved. 2  “The most powerful statistical computing language on the planet.” -Norman Nie, Developer of SPSS  Language + package + environment for graphics and data analysis  Free and open source  Created by Ross Ihaka & Robert Gentleman 1996 & extended by many more  An implementation of the S language by John Chambers and others  R has 4,950 add-ons, or nearly 100,000 procs 3 4
  • 2. 5 Source: r4stats.com/popularity 6 http://r4stats.com/popularity 1. Data input & management (data step) * SAS Approach; 2. Analytics & graphics procedures (proc step) DATA A; SET A; 3. Macro language logX = log(X); 4. Matrix language PROC REG; 5. Output management systems (ODS/OMS) MODEL Y = logX; R integrates these all seamlessly. # R Approach lm( Y ~ log(X) ) 7 8
  • 3.  Vast selection of analytics & graphics  New methods are available sooner  Many packages can run R (SAS, SPSS, Excel…)  Its object orientation “does the right thing”  Its language is powerful & fully integrated  Procedures you write are on an equal footing  It is the universal language of data analysis  It runs on any computer  Being open source, you can study and modify it  It is free 9 10 * Using SAS;  Language is somewhat harder to learn PROC TTEST DATA=classroom;  Help files are sparse & complex CLASS gender;  Must find R and its add-ons yourself VAR score;  Graphical user interfaces not as polished  Most R functions hold data in main memory # In R  Rule-of-thumb: 10 million values per gigabyte t.test(score ~ gender, data=classroom)  SAS/SPSS: billions of records  Several efforts underway to break R’s memory limit t.test(posttest, pretest , paired=TRUE, data=classroom) including Revolution Analytics’ distribution 11 12
  • 4.  Base R plus Recommended Packages like:  Email support is free, quick, 24-hours:  Base SAS, SAS/STAT, SAS/GRAPH, SAS/IML Studio  www.r-project.org/mail.html  SPSS Stat. Base, SPSS Stat. Advanced, Regression  Stackoverflow.com  Tested via extensive validation programs  Quora.com  But add-on packages written by…  Crossvalidated stats.stackexchange.com  Professor who invented the method? /questions/tagged/r  A student interpreting the method?  Phone support available commercially 13 14 1. Go to cran.r-project.org,  Comprehensive R Archive Network the Comprehensive R Archive Network  Crantastic.com 2. Download binaries for Base & run  Inside-R.org 3. Add-ons:  R4Stats.com install.packages(“myPackage”) 4. To update: update.packages() 15 16
  • 5. 17 18 19 20
  • 6.  Run code interactively  Submit code from Excel, SAS, SPSS,…  Point-n-click using Graphical User Interfaces (GUIs)  Batch mode 21 22 23 24
  • 7. Copyright © 2010, 2011, Robert A Muenchen. All rights reserved. 26 25 run ExportDataSetToR("mydata"); GET FILE=‘mydata.sav’. BEGIN PROGRAM R. submit/r; mydata <- spssdata.GetDataFromSPSS( mydata$workshop <- variables = c("workshop gender factor(mydata$workshop) q1 to q4"), summary(mydata) missingValueToNA = TRUE, endsubmit; row.label = "id" ) summary(mydata) END PROGRAM. 27 28
  • 8. 29 30 32 31
  • 9. 34 33  A company focused on R development & support  Run by SPSS founder Norman Nie  Their enhanced distribution of R: Revolution R Enterprise  Free for colleges and universities, including for outside consulting 35
  • 11. 43 44
  • 12. mydata <- read.csv("mydata.csv") > mydata <- read.csv("mydata.csv") print(mydata) > print(mydata) workshop gender q1 q2 q3 q4 mydata$workshop <- factor(mydata$workshop) 1 1 f 1 1 5 1 summary(mydata) 2 2 f 2 1 4 1 plot( mydata$q1, mydata$q4 ) 3 1 f 2 2 4 3 4 2 <NA> 3 1 NA 3 myModel <- lm( q4~q1+q2+q3, data=mydata ) 5 1 m 4 5 2 4 summary( myModel ) 6 2 m 5 4 5 5 anova( myModel ) 7 1 m 5 3 4 4 plot( myModel ) 8 2 m 4 5 5 5 45 46 > mydata$workshop <-factor(mydata$workshop) > summary(mydata) workshop gender 1:4 f :3 2:4 m :4 NA's:1 q1 q2 q3 q4 Min. :1.00 Min. :1.00 Min. :2.000 Min. :1.00 1st Qu.:2.00 1st Qu.:1.00 1st Qu.:4.000 1st Qu.:2.50 Median :3.50 Median :2.50 Median :4.000 Median :3.50 Mean :3.25 Mean :2.75 Mean :4.143 Mean :3.25 3rd Qu.:4.25 3rd Qu.:4.25 3rd Qu.:5.000 3rd Qu.:4.25 Max. :5.00 Max. :5.00 Max. :5.000 Max. :5.00 NA's :1.000 47 48
  • 13. > myModel <- lm(q4 ~ q1+q2+q3, data=mydata) > summary(myModel) Call: lm(formula = q4 ~ q1 + q2 + q3, data = mydata) Residuals: 1 2 3 5 6 7 8 -0.3113 -0.4261 0.9428 -0.1797 0.0765 0.0225 -0.1246 Coefficients: Estimate Std. Error t value Pr(>|t|) (Intercept) -1.3243 1.2877 -1.028 0.379 q1 0.4297 0.2623 1.638 0.200 q2 0.6310 0.2503 2.521 0.086 q3 0.3150 0.2557 1.232 0.306 Multiple R-squared: 0.9299, Adjusted R-squared: 0.8598 F-statistic: 13.27 on 3 and 3 DF, p-value: 0.03084 49 Copyright © 2010, 2011, Robert A Muenchen. All rights reserved. 50 51 52
  • 14.  R for SAS and SPSS Users, Muenchen  R for Stata Users, Muenchen & Hilbe  R Through Excel: A Spreadsheet Interface for Statistics, Data Analysis, and Graphics, Heiberger & Neuwirth  Data Mining with Rattle and R: The Art of Excavating Data for Knowledge Discovery, Williams 53 54  R is powerful, extensible, free  Download it from CRAN  Academics download Revolution R Enterprise for free at www.revolutionanalytics.com  You run it many ways & from many packages muenchen@utk.edu  Several graphical user interfaces are available  R's programming language is the way Slides: r4stats.com/misc/webinar Presentation: bit.ly/R-sas-spss to access its full power 55