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COVID-19 PANDEMIC
AN OVERVIEW
OUTLINE
• Introduction
• Epidemiology
• Aetiology
• Clinical features
• Diagnosis
• Treatment
• Infection prevention
• Conclusion
• References
INTRODUCTION
• Coronavirus disease 2019 (COVID-19) is a highly infectious respiratory
illness caused by a novel coronavirus, Severe Acute Respiratory Syndrome
Coronavirus 2 (SARS-CoV-2)
• First identified following an outbreak of respiratory illnesses in Wuhan,
China.
• Reported to WHO on 30/12/19, WHO declared it a global health emergency
on 30/01/20 and a global pandemic on 11/03/20.
EPIDEMIOLOGY 1
• As at today, coronavirus has being confirmed in:
• 10 million individuals worldwide, with over 507,000 deaths
• About 188 countries have reported laboratory confirmed cases
• The united states has the highest number of infections and deaths, followed
closely by Brazil.
• In Africa, South Africa has the highest number of reported infections, while
Egypt has the highest number of deaths.
EPIDEMIOLOGY 2
Nigeria recorded its first case on 27th February, 2020 after an Italian citizen,
resident in Lagos returned to the country from Italy.
Infections have been reported in 35 states and the FCT
• Total no of infections - 25,133
• Total no of recoveries - 9,402
• Total no of deaths - 573
• Lagos state has the highest no of infections and deaths
EPIDEMIOLOGY 3
• Among the first 32 cases in Nigeria
• 53% of them were 40 years and above
• 66% were male
• 94% had history of recent travel or contact with a confirmed case.
• 75% presented with moderate to severe symptoms
• 16% were asymptomatic
• 59% had fever
• 44% had dry cough
Open Source
Open source
Overview of COVID-19
Overview of COVID-19
Overview of COVID-19
0.0
5.0
10.0
15.0
20.0
25.0
30.0
(N%)
DISEASE
Most common comorbidities observed in coronavirus (COVID-19) deceased patients
in Italy as of May 2020
Aetiology
• The on-going pandemic started in late December, 2019, when several
patients presented with viral pneumonia in Wuhan, China and were
epidemiologically traced to the Huanan seafood market in Wuhan, where
non-aquatic animals were sold.
• A novel, human-infecting, rapid human-to-human transmitting severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2) provisionally named
2019 novel corona virus (2019-nCoV), was identified and has been
renamed as Coronavirus disease 2019 (COVID-19)
• Corona viruses are enveloped, single-
stranded, positive-sense RNA viruses of
the Coronaviridae family with genome
ranging from 26 to 32kb in length.
• They have been identified in bats,
mice, rats, chickens, turkeys, masked
palm civets, swine, dogs, cats, rabbits,
horses, cattle and humans, are known to
cause a wide range of disease
conditions that can vary from mild to
severe.
Overview of COVID-19
TRANSMISSION CHAIN
How a virus spreads: The 6 Links In The Chain
Of Infection; Liam Palmer, nurses.co.UK
TRANSMISSION MODES
PATHOPHYSIOLOGY 1
PATHOPHYSIOLOGY 2
• The virus enters the mucosa of the nose and throat, attaches to a cell-surface
receptor called angiotensin-converting enzyme 2 (ACE2).
• Once inside, the virus hijacks the cell’s machinery, making myriad copies of itself and
invading new cells. If the immune system doesn’t beat back SARS-CoV-2 during this
initial phase, the virus then marches down the windpipe to attack the lungs.
• As the immune system wars with this invader, there is disruption of healthy oxygen
transfer- this explains the reduced oxygen saturation in affected patients.
• Front-line white blood cells (lymphocytes and neutrophils) release inflammatory
molecules called chemokines, causes the immune defenses to overshoot, resulting in a
"cytokine storm."
PATHOPHYSIOLOGY 3
• The cytokine storm ultimately causes high fever, excessive leakiness of blood
vessels, blood clotting inside the body, extremely low blood pressure, lack of
oxygen and excess acidity of the blood, and pleural effusion
• White blood cells are misdirected to attack and inflame even healthy tissue,
leading to failure of the lungs, heart, liver, intestines, kidneys, and genitals
(Multiple Organ Dysfunction Syndrome, MODS). This may worsen and
shutdown the lungs (Acute Respiratory Distress Syndrome, ARDS)
Overview of COVID-19
Most common symptoms:
• Fever
• Dry cough
• Tiredness
Serious symptoms:
• Difficulty breathing or shortness
of breath
• Chest pain or pressure
• Loss of speech or movement
Less common symptoms:
• Aches and pains
• Sore throat
• Diarrhea
• Conjunctivitis
• Headache
• Loss of taste or smell
• A rash on skin, or
discoloration of fingers or
toes
DIAGNOSIS 1
• Real-time reverse transcriptase-
polymerase chain reaction (RT-PCR)
to detect the positive nucleic acid of
SARS-CoV-2 in sputum, throat swabs,
and secretions of the lower respiratory
tract sample is the gold standard.
• Discussions around rapid test and
antibody test are still not conclusive.
DIAGNOSIS 2
• Chest X-Ray Findings: The most frequent findings are bilateral, peripheral,
and lower lung zone airspace opacities, described as consolidation
• Chest CT-Scan Findings:
• Ground-glass opacities : bilateral, subpleural, peripheral
• Crazy paving appearance
• Air space consolidation
• Broncho-vascular thickening in the lesion
• Traction bronchiectasis
DIAGNOSIS 3
• Blood Tests Findings:
• Lymphopenia
• Increased prothrombin time (PT)
• Increased lactate dehydrogenase
• Mild elevated inflammatory markers (CRP and ESR)
• Elevated D-dimer
• Mildly deranged liver function test
• Deranged Kidney function test
TREATMENT
• No drugs have been approved for the prevention or treatment of
COVID-19 globally.
• Some drugs like remdesivir, hydroxychloroquine,
Azithromycin, lopinavir and ritonavir, ribavarin, and interferon-1-
beta are being tried.
• Numerous other antiviral agents, immunotherapies, and vaccines
continue to be investigated and developed as potential therapies.
• Current treatment is mainly symptomatic and supportive
• Recently steroids have been shown to help critically ill patients
PREVENTION
CONTROL
PREVENTION IN HEALTH CARE SETTING
•Ensure triage, early recognition, and source control
(isolating patients with suspected COVID-19)
•Apply standard precautions for all patients
•Implement empiric additional precautions (droplet and contact
and, whenever applicable, airborne precautions) for suspected cases of
COVID-19
•Implement administrative controls
•Use environmental and engineering controls
TRIAGING PROTOCOL
All hospitals must have a closed entry manned by trained security or
front desk personnel
Facilities should have a screening questionnaire for all entry into the
facility; both staff and patients
You must communicate clearly to the patients and staff about your
protocols
Patients can be screened in their cars or a screening tent
A written notice also helps to communicate with the patient
Difficult cases should be escalated to the management
www.fppt.com
Fever >37.5° axillary or >38.0°
core.
Does the person have
Cough (Dry/Wet)
Difficulty in breathing
Anosmia/Dysgeusia
Gastrointestinal symptoms
Note that travel history is no longer important as
there is evidence of sustained community
transmission
Malaise/fatigue
www.fppt.com
REDUCE UNNECESSARY CONTACT
WITH PATIENTS
• Telemedicine (telephone consults and Whatsapp calls
should be encouraged)
• Clinic visits should be based on appointments which must
be well spaced to prevent overcrowding
• Drug refills should be done without clinic visits
• Walk ins should be reduced to the barest minimum
• Cashless policy should be encouraged
• Only one visitor should be allowed per patient into the
facility
CONCLUSION
• Coronavirus is an ongoing public health concern with attendant
constraints on health care delivery.
• Patients with cancer are at high risk of dying if they contract the
disease. However, their care has being impacted during the pandemic
• Therefore, it is expedient to adopt ways to manage patients with
cancer during this pandemic.
REFERENCES
• World Health Organization. infection prevention and control during care when
COVID-19 is suspected: interim guidance(19 march 2020)
• World Health Organization. Consideration of quarantine individuals in the
context of containment for coronavirus disease: interim guidance(19 march,
2020)
• World Health Organization. Rational use of personal protective equipment for
coronavirus disease (COVID-19) and considerations during severe shortage:
interim guidance
• J.O Bamidele, O J Daniel Epidemiology of coronavirus disease in Nigeria:
annals of health researchvol.6 NO.2(2020)
• Max Roser, Hannah Ritchie, Esteban Ortiz-Ospina and Joe Hasell (2020) -
"Coronavirus Pandemic (COVID-19)". Published online at
OurWorldInData.org. Retrieved from: 'https://ourworldindata.org/coronavirus'
[Online Resource]

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Overview of COVID-19

  • 2. OUTLINE • Introduction • Epidemiology • Aetiology • Clinical features • Diagnosis • Treatment • Infection prevention • Conclusion • References
  • 3. INTRODUCTION • Coronavirus disease 2019 (COVID-19) is a highly infectious respiratory illness caused by a novel coronavirus, Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) • First identified following an outbreak of respiratory illnesses in Wuhan, China. • Reported to WHO on 30/12/19, WHO declared it a global health emergency on 30/01/20 and a global pandemic on 11/03/20.
  • 4. EPIDEMIOLOGY 1 • As at today, coronavirus has being confirmed in: • 10 million individuals worldwide, with over 507,000 deaths • About 188 countries have reported laboratory confirmed cases • The united states has the highest number of infections and deaths, followed closely by Brazil. • In Africa, South Africa has the highest number of reported infections, while Egypt has the highest number of deaths.
  • 5. EPIDEMIOLOGY 2 Nigeria recorded its first case on 27th February, 2020 after an Italian citizen, resident in Lagos returned to the country from Italy. Infections have been reported in 35 states and the FCT • Total no of infections - 25,133 • Total no of recoveries - 9,402 • Total no of deaths - 573 • Lagos state has the highest no of infections and deaths
  • 6. EPIDEMIOLOGY 3 • Among the first 32 cases in Nigeria • 53% of them were 40 years and above • 66% were male • 94% had history of recent travel or contact with a confirmed case. • 75% presented with moderate to severe symptoms • 16% were asymptomatic • 59% had fever • 44% had dry cough
  • 12. 0.0 5.0 10.0 15.0 20.0 25.0 30.0 (N%) DISEASE Most common comorbidities observed in coronavirus (COVID-19) deceased patients in Italy as of May 2020
  • 13. Aetiology • The on-going pandemic started in late December, 2019, when several patients presented with viral pneumonia in Wuhan, China and were epidemiologically traced to the Huanan seafood market in Wuhan, where non-aquatic animals were sold. • A novel, human-infecting, rapid human-to-human transmitting severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) provisionally named 2019 novel corona virus (2019-nCoV), was identified and has been renamed as Coronavirus disease 2019 (COVID-19)
  • 14. • Corona viruses are enveloped, single- stranded, positive-sense RNA viruses of the Coronaviridae family with genome ranging from 26 to 32kb in length. • They have been identified in bats, mice, rats, chickens, turkeys, masked palm civets, swine, dogs, cats, rabbits, horses, cattle and humans, are known to cause a wide range of disease conditions that can vary from mild to severe.
  • 16. TRANSMISSION CHAIN How a virus spreads: The 6 Links In The Chain Of Infection; Liam Palmer, nurses.co.UK
  • 19. PATHOPHYSIOLOGY 2 • The virus enters the mucosa of the nose and throat, attaches to a cell-surface receptor called angiotensin-converting enzyme 2 (ACE2). • Once inside, the virus hijacks the cell’s machinery, making myriad copies of itself and invading new cells. If the immune system doesn’t beat back SARS-CoV-2 during this initial phase, the virus then marches down the windpipe to attack the lungs. • As the immune system wars with this invader, there is disruption of healthy oxygen transfer- this explains the reduced oxygen saturation in affected patients. • Front-line white blood cells (lymphocytes and neutrophils) release inflammatory molecules called chemokines, causes the immune defenses to overshoot, resulting in a "cytokine storm."
  • 20. PATHOPHYSIOLOGY 3 • The cytokine storm ultimately causes high fever, excessive leakiness of blood vessels, blood clotting inside the body, extremely low blood pressure, lack of oxygen and excess acidity of the blood, and pleural effusion • White blood cells are misdirected to attack and inflame even healthy tissue, leading to failure of the lungs, heart, liver, intestines, kidneys, and genitals (Multiple Organ Dysfunction Syndrome, MODS). This may worsen and shutdown the lungs (Acute Respiratory Distress Syndrome, ARDS)
  • 22. Most common symptoms: • Fever • Dry cough • Tiredness Serious symptoms: • Difficulty breathing or shortness of breath • Chest pain or pressure • Loss of speech or movement Less common symptoms: • Aches and pains • Sore throat • Diarrhea • Conjunctivitis • Headache • Loss of taste or smell • A rash on skin, or discoloration of fingers or toes
  • 23. DIAGNOSIS 1 • Real-time reverse transcriptase- polymerase chain reaction (RT-PCR) to detect the positive nucleic acid of SARS-CoV-2 in sputum, throat swabs, and secretions of the lower respiratory tract sample is the gold standard. • Discussions around rapid test and antibody test are still not conclusive.
  • 24. DIAGNOSIS 2 • Chest X-Ray Findings: The most frequent findings are bilateral, peripheral, and lower lung zone airspace opacities, described as consolidation • Chest CT-Scan Findings: • Ground-glass opacities : bilateral, subpleural, peripheral • Crazy paving appearance • Air space consolidation • Broncho-vascular thickening in the lesion • Traction bronchiectasis
  • 25. DIAGNOSIS 3 • Blood Tests Findings: • Lymphopenia • Increased prothrombin time (PT) • Increased lactate dehydrogenase • Mild elevated inflammatory markers (CRP and ESR) • Elevated D-dimer • Mildly deranged liver function test • Deranged Kidney function test
  • 26. TREATMENT • No drugs have been approved for the prevention or treatment of COVID-19 globally. • Some drugs like remdesivir, hydroxychloroquine, Azithromycin, lopinavir and ritonavir, ribavarin, and interferon-1- beta are being tried. • Numerous other antiviral agents, immunotherapies, and vaccines continue to be investigated and developed as potential therapies. • Current treatment is mainly symptomatic and supportive • Recently steroids have been shown to help critically ill patients
  • 29. PREVENTION IN HEALTH CARE SETTING •Ensure triage, early recognition, and source control (isolating patients with suspected COVID-19) •Apply standard precautions for all patients •Implement empiric additional precautions (droplet and contact and, whenever applicable, airborne precautions) for suspected cases of COVID-19 •Implement administrative controls •Use environmental and engineering controls
  • 30. TRIAGING PROTOCOL All hospitals must have a closed entry manned by trained security or front desk personnel Facilities should have a screening questionnaire for all entry into the facility; both staff and patients You must communicate clearly to the patients and staff about your protocols Patients can be screened in their cars or a screening tent A written notice also helps to communicate with the patient Difficult cases should be escalated to the management www.fppt.com
  • 31. Fever >37.5° axillary or >38.0° core. Does the person have Cough (Dry/Wet) Difficulty in breathing Anosmia/Dysgeusia Gastrointestinal symptoms Note that travel history is no longer important as there is evidence of sustained community transmission Malaise/fatigue www.fppt.com
  • 32. REDUCE UNNECESSARY CONTACT WITH PATIENTS • Telemedicine (telephone consults and Whatsapp calls should be encouraged) • Clinic visits should be based on appointments which must be well spaced to prevent overcrowding • Drug refills should be done without clinic visits • Walk ins should be reduced to the barest minimum • Cashless policy should be encouraged • Only one visitor should be allowed per patient into the facility
  • 33. CONCLUSION • Coronavirus is an ongoing public health concern with attendant constraints on health care delivery. • Patients with cancer are at high risk of dying if they contract the disease. However, their care has being impacted during the pandemic • Therefore, it is expedient to adopt ways to manage patients with cancer during this pandemic.
  • 34. REFERENCES • World Health Organization. infection prevention and control during care when COVID-19 is suspected: interim guidance(19 march 2020) • World Health Organization. Consideration of quarantine individuals in the context of containment for coronavirus disease: interim guidance(19 march, 2020) • World Health Organization. Rational use of personal protective equipment for coronavirus disease (COVID-19) and considerations during severe shortage: interim guidance • J.O Bamidele, O J Daniel Epidemiology of coronavirus disease in Nigeria: annals of health researchvol.6 NO.2(2020) • Max Roser, Hannah Ritchie, Esteban Ortiz-Ospina and Joe Hasell (2020) - "Coronavirus Pandemic (COVID-19)". Published online at OurWorldInData.org. Retrieved from: 'https://ourworldindata.org/coronavirus' [Online Resource]

Editor's Notes

  • #8: Case Fatality Ratio range - 0.3% in Nepal to 14.5% in Italy - Case Fatality Rate (CFR) is the ratio between confirmed deaths and confirmed cases Nigeria: 0.38 to 14.29, depending on which state you are in
  • #11: Please pay attention to the position of CANCER in China
  • #12: Cancer in New York- About 8%
  • #15: Several coronaviruses have been identified as pathogenic to humans, most, causing mild to moderate symptoms with two notable exceptions: severe acute respiratory syndrome coronavirus (SARS-CoV), which emerged in southern China in November, 2002, infected about 8000 people in 37 countries and killed 774 people; and the Middle East respiratory syndrome coronavirus (MERS-CoV), first detected in Saudi Arabia in 2012, which infected 2494 people and killed and 858 people.
  • #16: COVID-19
  • #17: The three main transmission mode: 1) droplets transmission, 2) contact transmission, and 3) aerosol transmission. 
  • #19: Following the binding of SARS-CoV-2 to the host protein, the spike protein undergoes protease cleavage which activates the spike for membrane fusion via irreversible, conformational changes. (you may use this as your starting sentence then continue to speak to the diagram)
  • #20: Read this thoroughly so you don’t have to read it line for line.
  • #22: The whole range of presentation is evolving!
  • #23: COVID-19 affects different people in different ways. Most infected people may be asymptomatic, develop mild to moderate illness and recover without hospitalization. On average it takes 5–6 days from when someone is infected with the virus for symptoms to show, however it can take up to 14 days.
  • #24: RT_PCR : Its sensitivity is predicated on time since exposure to SARS-CoV-2, with a false negative rate of 100% on the first day after exposure, dropping to 67% on the fourth day. On the day of symptom onset (~4 days after exposure) the false negative rate remains at 38%, and it reaches its nadir of 20% three days after symptoms begin (8 days post exposure). From this point on, the false negative rate starts to climb again reaching 66% on day 21 after exposure 
  • #30: Talk through these instead