Pap.macroevolution

Macroevolution: Change above the species level
NABT 2006 Evolution Symposium
Introduction
The basic concept of evolution – change over time – can be examined in two
different time frames. The first, which considers the time period covering a few
generations for a population, is microevolution. There are many examples of
microevolution that are handy for teaching, such as drug resistance (NESCent 2006a) and
changes in beak size of finches in the Galapagos (NESCent 2006b). Macroevolution is
the study of evolution over geologic time (thousands to millions of years). It tends to be
a much more challenging idea to teach since it
requires an awareness of geologic time, and relies
on inferences from fossils and other records of
historical events, complicated molecular
analyses, and phylogenies. In general it is more
difficult to grasp because it offers fewer tangible
ideas. Examples of macroevolution are found in
the organismal diversity all around us, but the
process cannot be observed or experimentally
manipulated due to the time frame involved. What scientists can do is compare the
results of “natural experiments”, as seen in fossils and modern organisms, and make
inferences from them. The applications of macroevolution in modern life tend to be less
obvious than microevolution because of the extreme time scale. One application of
macroevolution is in the development of conservation plans (NESCent 2006c) because
macroevolution examines the generation of new species and the decline of species – key
pieces of information for effective conservation efforts.
Speciation
Speciation is a key concept in
macroevolution, in which the generation
of new species and loss of species are
major areas of study. A basic definition
of a species is “a reproductively isolated
population”. Although identifying
extinct species from fossil evidence can
be challenging, studying the concept of
species is easier on a macroevolutionary
scale, since the question of when they
formed or disappeared is the focus, as
opposed to how they arose. Fuzzy areas that create problems in defining species in
microevolutionary terms, such as hybrid zones (regions in which different species come
in to contact and reproduce), vanish in the face of thousands of years, leaving records of
morphologically distinct species for examination. Studying extinct species is an
interesting puzzle in which various incomplete bits of information are combined to build

a whole picture. Typically, extinct species are defined by the morphology (structure or
form) of fossils, which is compared with other fossils and the morphology of current
(extant) species. The comparison can provide information about how the extinct species
lived, or in cases of incomplete fossil skeletons, may provide an idea of what the missing
parts may have looked like.
Phylogenetic Trees and Molecular Studies
These morphological comparisons are also used to build phylogenetic trees which
demonstrate relationships between species. Extensive morphological analysis of fossils
and modern birds has allowed scientists to draw phylogenetic trees demonstrating the
relationship between dinosaurs and birds. Shared morphological characteristics of a
particular group are called a synapomorphies, and synapomorphies are important in
building accurate phylogenetic trees. Similar morphologies can be misleading, such as
bat wings and bird wings, or the bodies of sharks and dolphins. These are actually
examples of convergent evolution, in which independent groups evolve similar
characteristics in similar environments. It is difficult to differentiate between
synapomorphies and convergent evolution, so scientists rely on multiple sources of
information: several morphological characteristics, behavior, physiology, environment,
etc. Much of this information is missing for fossils, and it is not uncommon for
phylogenetic trees to be revised when new fossil evidence is discovered. Although
fossils may be set in stone, the interpretation of what they mean is not!
Sometimes phylogenetic trees can link extinct species with extant species and in
these cases additional information about the validity of the tree can be drawn from
molecular comparisons between extant groups. For example, questions about the
evolution of whales were partially solved by morphological comparison of fossils with
both extant and extinct species resulting in two possible phylogenetic trees; a molecular
comparison between whales and other extant species provided critical information to
decide between the trees. Occasionally molecular information can be gathered from
preserved tissues, bones, or waste products. Insects in amber, mammoths in permafrost
(NESCent 2006d), packrat middens and Neandertal bones are all examples of extinct
species providing DNA samples for analysis. These samples provide exciting
opportunities to examine molecular changes that may have played a role in speciation.
EvoDevo
The field of “EvoDevo”, which looks at development
from an evolutionary standpoint, has provided a great deal of
information in recent years particularly in regard to development
of complex body structures. The discovery of a set of control
genes, referred to as the homeotic genes, has allowed scientists to
understand how complex body plans are initially laid out in
embryonic stages. The homeotic genes are a suite of genes
found in animals that determine the axes of embryos, then
control how embryos are divided into segments, and initiate the

development of appropriate body parts in each segment. This system is interesting
because it answers so many developmental questions and also because it provides a
reasonable method for development of radically different body plans. For example,
additional appendages can be accounted for by duplications of segments driven by the
homeotic genes. Extra appendages provide an
opportunity for the evolution of new functions, such
as the pinchers on this scorpion. An important aspect
of homeotic genes is their universality. Versions of
the homeotic genes are found in all animals and in
experiments have been shown to retain their ability to
direct development across species. When the gene
that initiates eye development in mice is put into
mutant fruit flies lacking their own homeotic gene for
eye development, the mouse gene initiates the
development of perfect fly eyes. This common control pathway indicates a deep, shared
lineage for all animals on a macroevolutionary scale. On a practical level, it has
implications for understanding and treating birth defects and other medical problems.
Molecular biology has lead to a greater understanding of how complex body
forms developed, but on a more basic level questions remain about the transitions at the
cellular level: from single celled to multicellular organisms, and from prokaryote to
eukaryote. These questions are very basic, and the transitions are not straightforward but
are important to understand. A single cell is limited in size and capabilities, but a
multicellular organism must develop complex systems to allow communication and
cooperation between cells for group success. The choanoflagellates are single celled
organisms that sometimes live as colonies. They are suspected to be similar to the
forerunners of multicellular animals based on morphological and molecular similarities.
Research in this area can help us understand how cells work together to form a single
organism.
Macroevolution and Extinction
While macroevolution research provides much information on the development of
new life at many levels, macroevolution is also intimately concerned with extinction, the
loss of species. It has been said that all species go extinct; some just take longer than
others. This extinction rate is generally balanced by speciation events. There appears to
be a certain “normal” level of background extinction and this type of extinction is of
critical importance to understand as we work to design effective conservation measures.
Research in macroevolution trends and events can help us determine what is normal and
what we need to be concerned about. This research can inform our efforts to maximize
the impact of our conservation efforts. For example, research on “refugia” or areas in a
region that have remained stable habitats over long periods of time can identify areas
with proven conservation value. Targeting these areas can be more effective than saving
larger areas of land in less stable environments.
Extinction does not always occur at a background rate. There have been at least
five major extinction events in which large percentages of all living organisms became
extinct. The largest mass extinction was the Permian-Triassic period (200-300 million

years ago or mya) in which about 96% of marine
species, and 70% of land species were lost. One
aspect of study is determining why certain species
survived, while others did not. There is some
evidence that geographic distribution may play a role
in survival, along with other factors such as
population size. The rules of extinction may differ
between species as well. Another aspect of mass
extinction research is determining the factors
involved. Were all mass extinctions triggered by
catastrophes, such as meteor impacts or were there a
number of less than catastrophic factors that added up
to a catastrophic effect? Many scientists believe we are currently in a sixth mass
extinction; one that is largely due to the effects of humans on the biosphere.
Radiation
In each of these mass extinction events, many ecological niches are left
unoccupied. This eventually allows radiation, rapid diversification, to occur. New
species evolve over a few million years - relatively short order geologically speaking - to
exploit open niches. After dinosaurs were lost in the Cretaceous-Tertiary mass
extinction, mammals diversified and became the dominant land species. If the current
rate of extinction continues unabated and we truly experience a sixth mass extinction, it is
possible that the biosphere will be altered beyond our recognition and even beyond our
ability to survive. Over millions of years, new ecological systems will evolve which may
originate with surviving species, but the resulting world will probably look as strange to
us as the world of the dinosaurs.
The Cambrian Explosion, which occurred about 542 mya, is a famous example of
radiation. Organisms diversified wildly and a wide array of fossil animals appear in a
geologic moment, about 542 mya. The Cambrian Explosion may actually be a misnomer,
as some scientists now suspect that the diversification began much earlier but is not well
reported in the fossil record. Nevertheless, the Cambrian Explosion remains of interest
because it appears to be the point at which nearly all the major animal taxa were
established.
Conclusion
The concept of macroevolution is scientifically solid, as is microevolution. As
with all fields in science, as one delves deeper into the literature and research the picture
becomes more complicated. In macroevolution, there are ongoing discussions about the
rates, causes, and methods of extinction. There is debate about what the presence or
absence of a particular fossil means. Information is re-interpreted as dating techniques
improve, and new fossils are discovered. This is a prime example of how science works.
Knowledgeable people develop ideas, test them with new data, and make the information
available to the scientific community. The community examines the ideas and tests and
after often extended and vigorous debate and further testing, either rejects or accepts the

ideas. Even accepted theories continue to develop over time. The core concept will
remain the same, but as our knowledge increases, the details of the theory may be
modified in recognition of our improved understanding. It is vital to our survival as a
species to continue to increase our understanding of how evolution, both micro- and
macro-, function. We are a part of the biosphere and we need to understand how the
system works to ensure that we do not overwhelm and irrevocably damage it to our
ultimate peril.
References
NESCent Examples of Evolution. 2006a. Disease.
http://eog.nescent.org/ExamplesEvolution.htm
NESCent Evolution in the News Archives. 2006b. Speedy Evolution in Galapagos
Finches. eog.nescent.org.
NESCent Evolutionary Science at NESCent. 2006c. Historical Perspectives on the
Distribution of Biodiversity in Madagascar .
http://eog.nescent.org/EvolutionaryScience.htm
NESCent Evolution in the News. 2006d. Peering into the past through DNA.
http://eog.nescent.org/ArchivedNews.htm
General References
Carroll, S. 2005. Endless Forms Most Beautiful. W.W. Norton and Co.
Freeman, S. and J.C. Herron. 2004. Evolutionary Analysis. Pearson Prentice Hall.
Raup, D. M. 1991. Extinction: Bad Genes or Bad Luck? W.W. Norton and Co.
Written by Kristin P. Jenkins, Ph.D. for the National Evolutionary Synthesis Center.
Contact eog@nescent.org for further information.

Pap.macroevolution

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