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Selective Breeding
•  Definition
• Selective breeding is also known as artificial selection. It is
  humans selecting desirable traits in a species and choosing
  which individuals breed in order to increase these traits in
  the species.

• All crops and domesticated animals today are a product of
  selective breeding.
Selective breeding v’s natural selection
• Natural selection is certain individuals of a species being
  “fitter”, possessing alleles which make them more successful
  in their environment. These individuals survive longer and
  produce more offspring. Therefore more of their alleles are
  passed on to the next generation and over time these alleles
  become more common in the gene pool
• In selective breeding humans determine which phenotypes,
  and therefore genotypes are desirable in the species. They
  then increase the alleles for these traits through breeding
  programmes. Often the species produced would be unable to
  survive in the wild
Selective breeding – nothing new
• Agriculture began 10,000yrs ago. Humans selected wild
  varieties of plants and animals with the traits they desired
  and began selective breeding to increase these desired traits;
  e.g. to produce bigger, easier to harvest grains with a greater
  yield, to breed animals that were the most docile and easy to
  handle.
From Biozone powerpoint ‘cultural evolution’
From Biozone powerpoint ‘cultural evolution’
Selective breeding animals
• Belgium Blue cattle – cattle bred to produce a huge amount
  of muscle (meat). Produced by selecting individuals with a
  mutation in myostatin gene which results in the production of
  an increased number of muscle fibres (hyperplasia)

• Excess muscle growth begins in utero so calves have to be
  born by caesarean section.

• Fertilisation is almost always by artificial insemination,
  meaning that sperm can be shipped across continents and
  only the ‘best’ bulls are selected to breed.
Selective breeding -methods
• Inbreeding is reproduction from the mating of parents who
  are closely related genetically.

• Livestock breeders often practice controlled breeding to
  eliminate undesirable characteristics within a population,
  which is also coupled with culling of what is considered unfit
  offspring, especially when trying to establish a new and
  desirable trait in the stock.

• Repeated test crosses are often used in order to produce
  pure breeding individuals
Modern corn

   Ancient corn
    from Peru
    (~4000 yrs old)




Choosing only the best corn plants for seeds results
in better crops over a long time.
Selective breeding powerpoint
Polyploidy
• Polyploidy is a mutation that occurs during meiosis and
  results in multiple sets of chromosomes (3n/4n etc)
• Polyploidy is usually fatal in animal species, but frequently
  occurs in plants.
• Polyploid plants have bigger fruits and grains and infertile
  polyploid are seedless. These traits are selected for in
  selective breeding programmes
• Polyploidy can be induced in plants using a chemical called
  colchine. This is used to produce bigger, stronger polyploid
  plants and to make fertile polyploid plants.
From Biozone Powerpoint ‘Mutations’
How To Make A Fertile Polyploid Hybrid




To produce a tetraploid plant, the alkaloid colchicine is applied to the terminal bud of
a branch. All the cells in the developing branch will be tetraploid (4n) with four sets of
chromosomes. This includes cells of the stem, leaves, flowers and fruit. Gametes (egg
and sperm) produced by a flower on this tetraploid branch will be diploid (2n) with
two sets of chromosomes. A flower on the normal diploid (2n) branch will produce
haploid (n) gametes containing one set of chromosomes.

                  http://waynesword.palomar.edu/hybrids1.htm
How Colchicine induces polyploidy
The original mother cell is diploid (2n). During anaphase the chromatids separate and
move to opposite ends of the cell. Colchicine causes the dissolution (depolymerization)
of protein microtubules which make up the mitotic spindle in dividing cells. This leaves
the cell with twice as many single chromosomes (four sets rather than two). When this
cell divides, each of the two daughter cells will have fours sets of chromosomes, a total
of eight chomosomes per cell. [Note: Spindle poisons such as colchicine are used to
prevent tumor cells from dividing in certain chemotherapy treatments.]




    http://waynesword.palomar.edu/hybrids1.htm
Genome analysis
• Genome analysis is determining the locus (position
  on the chromosome) and base sequence of all an
  organisms genes.
• Chromosome mapping determines on which
  chromosome and at which locus a gene occurs.
• DNA sequencing determines the exact base
  sequence of each gene, it can be used to distinguish
  between different alleles.
• Genome analysis is used in selective breeding to
  determine if an individual has a specific, desired
  allele and to select individuals for breeding
  programmes based on their alleles
Genome analysis and selective breeding -
                   examples
• Genome analysis of kiwifruit is being used to selectively breed
  new, trademarked varieties of fruit with characteristics such
  as disease resistance.
Source: http://www.plantandfood.co.nz/page/our-research/breeding-
   genomics/


• Sheep in NZ are being selectively bred to be immune to facial
  eczema, a fungal disease that can destroy whole flocks.
  Genome analysis of sheep was carried out and individuals
  immune to the disease were selected for a breeding
  programme. Source:Ag research NZ
Other Applications of Selective
              breeding
• Breeding programmes for endangered species, may involve
  genome analysis and selection of the least genetically related
  individuals to breed (to maintain genetic diversity in the
  species).




• Selective breeding programmes have resulted in higher yields
  and better disease resistance in aquaculture species, such as
  salmon.
Implications of selective breeding
• We are concerned with the biological implications of
   selective breeding that may impact on :
1. Ecosystems
2. Genetic biodiversity
3. Health or survival of individuals
4. Survival of populations
5. Evolution of populations

Brainstorm some possible (general) implications of
  selective breeding for each of these.

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Selective breeding powerpoint

  • 2. •  Definition • Selective breeding is also known as artificial selection. It is humans selecting desirable traits in a species and choosing which individuals breed in order to increase these traits in the species. • All crops and domesticated animals today are a product of selective breeding.
  • 3. Selective breeding v’s natural selection • Natural selection is certain individuals of a species being “fitter”, possessing alleles which make them more successful in their environment. These individuals survive longer and produce more offspring. Therefore more of their alleles are passed on to the next generation and over time these alleles become more common in the gene pool • In selective breeding humans determine which phenotypes, and therefore genotypes are desirable in the species. They then increase the alleles for these traits through breeding programmes. Often the species produced would be unable to survive in the wild
  • 4. Selective breeding – nothing new • Agriculture began 10,000yrs ago. Humans selected wild varieties of plants and animals with the traits they desired and began selective breeding to increase these desired traits; e.g. to produce bigger, easier to harvest grains with a greater yield, to breed animals that were the most docile and easy to handle.
  • 5. From Biozone powerpoint ‘cultural evolution’
  • 6. From Biozone powerpoint ‘cultural evolution’
  • 7. Selective breeding animals • Belgium Blue cattle – cattle bred to produce a huge amount of muscle (meat). Produced by selecting individuals with a mutation in myostatin gene which results in the production of an increased number of muscle fibres (hyperplasia) • Excess muscle growth begins in utero so calves have to be born by caesarean section. • Fertilisation is almost always by artificial insemination, meaning that sperm can be shipped across continents and only the ‘best’ bulls are selected to breed.
  • 8. Selective breeding -methods • Inbreeding is reproduction from the mating of parents who are closely related genetically. • Livestock breeders often practice controlled breeding to eliminate undesirable characteristics within a population, which is also coupled with culling of what is considered unfit offspring, especially when trying to establish a new and desirable trait in the stock. • Repeated test crosses are often used in order to produce pure breeding individuals
  • 9. Modern corn Ancient corn from Peru (~4000 yrs old) Choosing only the best corn plants for seeds results in better crops over a long time.
  • 11. Polyploidy • Polyploidy is a mutation that occurs during meiosis and results in multiple sets of chromosomes (3n/4n etc) • Polyploidy is usually fatal in animal species, but frequently occurs in plants. • Polyploid plants have bigger fruits and grains and infertile polyploid are seedless. These traits are selected for in selective breeding programmes • Polyploidy can be induced in plants using a chemical called colchine. This is used to produce bigger, stronger polyploid plants and to make fertile polyploid plants.
  • 12. From Biozone Powerpoint ‘Mutations’
  • 13. How To Make A Fertile Polyploid Hybrid To produce a tetraploid plant, the alkaloid colchicine is applied to the terminal bud of a branch. All the cells in the developing branch will be tetraploid (4n) with four sets of chromosomes. This includes cells of the stem, leaves, flowers and fruit. Gametes (egg and sperm) produced by a flower on this tetraploid branch will be diploid (2n) with two sets of chromosomes. A flower on the normal diploid (2n) branch will produce haploid (n) gametes containing one set of chromosomes. http://waynesword.palomar.edu/hybrids1.htm
  • 14. How Colchicine induces polyploidy The original mother cell is diploid (2n). During anaphase the chromatids separate and move to opposite ends of the cell. Colchicine causes the dissolution (depolymerization) of protein microtubules which make up the mitotic spindle in dividing cells. This leaves the cell with twice as many single chromosomes (four sets rather than two). When this cell divides, each of the two daughter cells will have fours sets of chromosomes, a total of eight chomosomes per cell. [Note: Spindle poisons such as colchicine are used to prevent tumor cells from dividing in certain chemotherapy treatments.] http://waynesword.palomar.edu/hybrids1.htm
  • 15. Genome analysis • Genome analysis is determining the locus (position on the chromosome) and base sequence of all an organisms genes. • Chromosome mapping determines on which chromosome and at which locus a gene occurs. • DNA sequencing determines the exact base sequence of each gene, it can be used to distinguish between different alleles. • Genome analysis is used in selective breeding to determine if an individual has a specific, desired allele and to select individuals for breeding programmes based on their alleles
  • 16. Genome analysis and selective breeding - examples • Genome analysis of kiwifruit is being used to selectively breed new, trademarked varieties of fruit with characteristics such as disease resistance. Source: http://www.plantandfood.co.nz/page/our-research/breeding- genomics/ • Sheep in NZ are being selectively bred to be immune to facial eczema, a fungal disease that can destroy whole flocks. Genome analysis of sheep was carried out and individuals immune to the disease were selected for a breeding programme. Source:Ag research NZ
  • 17. Other Applications of Selective breeding • Breeding programmes for endangered species, may involve genome analysis and selection of the least genetically related individuals to breed (to maintain genetic diversity in the species). • Selective breeding programmes have resulted in higher yields and better disease resistance in aquaculture species, such as salmon.
  • 18. Implications of selective breeding • We are concerned with the biological implications of selective breeding that may impact on : 1. Ecosystems 2. Genetic biodiversity 3. Health or survival of individuals 4. Survival of populations 5. Evolution of populations Brainstorm some possible (general) implications of selective breeding for each of these.