The Complexity of Survival
This image shows all different journeys toward surviving
a final admission for Heart Failure. Each journey starts at
a tiny brilliant point in the periphery of the huge graph
network and represents at least 11 people who are traveling
together on a shared clinical pathway of similar events
toward the center (showed as edges). Surfing their specific
paths toward a common destiny of surviving final
hospitalization, at points each group joins others and forms
bigger points. Points are colored based on general
diagnostic group of the primary admission diagnosis that
all patients share at each point. We used multilevel map of
CSS diagnostic coding for this purpose.
We used California HCUP inpatient datasets of 2006 to
2011 of 24 million patients to extract and map information
of 153064 heart failure patients who survived a heart
failure admission between 2009 and 2011 and had at least
one admission before that in our dataset.
To generate this graph we started by creating sequences of
healthcare utilization events of patients. Then anchoring
the latest event in the center of the graph we mapped each
sequence on the graph. We merged similar events of
patients and created branches each time a sequence was
different than existing ones. Finally we simplified the
graph as a tree structure. Data is processed using a number
of tools, most importantly F# and R programming
languages, Quickgraph and igraph libraries and visualized
using Cytoscape V3.
This image is result of a 2 years project for patient journey
analysis (patient trajectory analysis) conducted in Center
for Outcomes Research and Evaluation in the university
wide Big Data To Knowledge, BD2K, movement.
This image shows the complexity of life and surviving and
contrasts with the other image that we are applying and
shows the decisive and succinct patterns of death
March 2015
Abbas Shojaee M.D.
Associate Research Scientist in Health Data Science
Abbas Shojaee, Yale University

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The Complexity of Survival

  • 1. The Complexity of Survival This image shows all different journeys toward surviving a final admission for Heart Failure. Each journey starts at a tiny brilliant point in the periphery of the huge graph network and represents at least 11 people who are traveling together on a shared clinical pathway of similar events toward the center (showed as edges). Surfing their specific paths toward a common destiny of surviving final hospitalization, at points each group joins others and forms bigger points. Points are colored based on general diagnostic group of the primary admission diagnosis that all patients share at each point. We used multilevel map of CSS diagnostic coding for this purpose. We used California HCUP inpatient datasets of 2006 to 2011 of 24 million patients to extract and map information of 153064 heart failure patients who survived a heart failure admission between 2009 and 2011 and had at least one admission before that in our dataset. To generate this graph we started by creating sequences of healthcare utilization events of patients. Then anchoring the latest event in the center of the graph we mapped each sequence on the graph. We merged similar events of patients and created branches each time a sequence was different than existing ones. Finally we simplified the graph as a tree structure. Data is processed using a number of tools, most importantly F# and R programming languages, Quickgraph and igraph libraries and visualized using Cytoscape V3. This image is result of a 2 years project for patient journey analysis (patient trajectory analysis) conducted in Center for Outcomes Research and Evaluation in the university wide Big Data To Knowledge, BD2K, movement. This image shows the complexity of life and surviving and contrasts with the other image that we are applying and shows the decisive and succinct patterns of death March 2015 Abbas Shojaee M.D. Associate Research Scientist in Health Data Science Abbas Shojaee, Yale University