SlideShare a Scribd company logo
@AIME, Pavia, 19th June 2015
Linked Open Data for Medical
Guidelines Interactions
Veruska Zamborlini,
Marcos da Silveira, Cedric Pruski, Annette ten Teije and Frank van Harmelen, Rinke Hoekstra
Epidemiology of multimorbidity and implications for health care, research, and medical education: a cross-sectional study (2012)
Karen Barnett, Stewart W Mercer, Michael Norbury, Prof Graham Watt, Prof Sally Wyke, Bruce Guthrie
Project Smart Ward
Expectation:
multi-morbidity holds for psychiatric patients as well
In practice:
✤ Paper-based Clinical Guideline (CG)
✤ One guideline per disease
✤ Common co-morbidities (2) are
addressed during CG development
✤ Not suitable for detecting interactions
What about…
✤ Computer-interpretable
Clinical Guideline (CIG)
✤ How to combine CIGs?
✤ CIG Languages:
✤ mainly designed for execution
✤ not suitable for detecting
interactions
What do we propose?
✤ Address multimobidity at CG level:
✤ scalable in number of guidelines
✤ reusable rules designed for diverse types of interactions
✤ binary cumulative rules - allows for combination of n recommendations
✤ represent recommendations based on transitions promoted by actions
✤ do give aspirin x don’t give aspirin
=> different recommendations about the same action
✤ hierarchy of actions
✤ causation beliefs
✤ reuse of existent background knowledge available online (LOD)
Case Study
Case Study
Case Study
Case Study
Case Study
Case Study
Case Study
Case Study
Reusable Rules
IF Positive recommendation R1 to action A1
& Negative recommendation R2 to action A2
& Actions A1 and A2 are the same or subsuming one another
THEN R1 and R2 might contradict each other
FOL Rules
Systematic Analysis
Systematic Analysis
Case Study
Conclusion so far
✤ Address multimobidity at CG level:
✤ reusable/domain-independent rules for detecting types of interactions
✤ scalable in number of guidelines
Next step
✤ Re-use of existent background knowledge available online (LOD)
27
Ibuprofen
Incompatible Drugs
Drugbank
Aspirin
28
Ibuprofen
Incompatible Drugs
Drugbank
Aspirin
29
Ibuprofen
Incompatible Drugs
Drugbank
Aspirin
Incompatible
30
Ibuprofen
Drugbank
Aspirin
Anti-platelets
Epoprostenol
31
Ibuprofen
Drugbank
Aspirin
Anti-platelets
Epoprostenol
32
Ibuprofen
Drugbank
Aspirin
Anti-platelets
Epoprostenol
Alternative Drug
Alternative Drug
33Ibuprofen
High Blood
Pressure
Side-EffectSide-Effect
Sider
Thiazide
High Blood
Sugar Level
34Ibuprofen
High Blood
Pressure
Side-EffectSide-Effect
Sider
Thiazide
High Blood
Sugar Level
35Ibuprofen
High Blood
Pressure
Side-EffectSide-Effect
Sider
Thiazide
High Blood
Sugar Level
36Ibuprofen
High Blood
Pressure
Side-EffectSide-Effect
Sider
Thiazide
High Blood
Sugar Level
Side-Effect
Side-Effect
Using LOD
37
Using LOD
38
Using LOD
39
Using LOD
40
Using LOD
41
Using LOD
42
Using LOD
43
Using LOD
44
Our guideline model in LOD
using NanoPublications
standard
45
Nanopublication
46
Provenance about the publication:
When, by whom, how this publication was
produced…
“Atomic” piece of information:
E.g. causation beliefs, recommendations.
Provenance about the assertion:
Who/where it was originally asserted;
In case the source is a text, the specific piece od
text can also be pointed out.
Nanopublication
47
Nanopublication
48
Conclusion
49
✤Guideline model: represent recommendations based on
transitions promoted by actions
(hierarchy of actions & causation beliefs)
✤ Address multimobidity at guideline level
✤ scalable in number of guidelines
✤ reusable rules designed for diverse types of interactions
✤Semantic web technology
✤ reuse of existent background knowledge available online (LOD)
✤ use nano publications for guideline model
Smart Ward: use of guidelines
Smart Ward:
interactions detection independent of
specific diseases
Relevant technology
Linked Open Data for Medical  Guidelines Interactions

More Related Content

PDF
Sepsis and Septic shock
PDF
Managing AMR- the case of Ghana. Martha Gyansa-Lutterod (Ghana)
PDF
Why collect data on age and gender. Hege Salvesen Blix (Norway)
PDF
KIF1A.ORG Path to Treatment
PDF
Screen breast cancer switzerland bmj 2014_Sophie Arie
PPTX
a-pharmacokinetic-analysis-and-pharmacogenomic-study-of-6-mercaptopurine-inte...
PPTX
How the Web can change social science research (including yours)
PPT
Evolving the Web into a Global Dataspace – Advances and Applications
Sepsis and Septic shock
Managing AMR- the case of Ghana. Martha Gyansa-Lutterod (Ghana)
Why collect data on age and gender. Hege Salvesen Blix (Norway)
KIF1A.ORG Path to Treatment
Screen breast cancer switzerland bmj 2014_Sophie Arie
a-pharmacokinetic-analysis-and-pharmacogenomic-study-of-6-mercaptopurine-inte...
How the Web can change social science research (including yours)
Evolving the Web into a Global Dataspace – Advances and Applications

Similar to Linked Open Data for Medical Guidelines Interactions (20)

PDF
Can drug repurposing be saved with AI 202405.pdf
PDF
RxpredictPresentation.pdf
PPTX
Beating the Beast: Best Current Pharmacological Modalities for Treating Covid...
PDF
Drug analytics based on triple linking v1.0
PDF
Multi-omics for drug discovery: what we lose, what we gain
PPTX
Validation of Microbiological Methods
PPTX
Building ADR reporting culture for patient safety.pptx
PDF
New pattern clinical study
PDF
2015 04-13 Pharma Nutrition 2015 Philadelphia Alain van Gool
PDF
Diabetes Mellitus Prediction System Using Data Mining
PPT
26 Oct 2017 Genetics and precision medicine Milano Cornel.ppt
PDF
Designing Causal Inference Studies Using Real-World Data
PDF
Amia tbi-14-final
PPTX
Thesis viva presentation reg. 24520011 (1).pptx
PDF
Pharmaceutical Comparative Effectiveness Research Abstract
PDF
Signal detection and their assessment in clinical trials
PDF
2016 11 17 aaps_337 denver vulto biosimilars interchangeability vs16k16agv
PPTX
Dr. RM Pandey -Importance of Biostatistics in Biomedical Research.pptx
PPTX
BioVariance - Pediatric Pharmacogenomics in Drug Discovery
PPT
Drug risk assessment 23 4-2010
Can drug repurposing be saved with AI 202405.pdf
RxpredictPresentation.pdf
Beating the Beast: Best Current Pharmacological Modalities for Treating Covid...
Drug analytics based on triple linking v1.0
Multi-omics for drug discovery: what we lose, what we gain
Validation of Microbiological Methods
Building ADR reporting culture for patient safety.pptx
New pattern clinical study
2015 04-13 Pharma Nutrition 2015 Philadelphia Alain van Gool
Diabetes Mellitus Prediction System Using Data Mining
26 Oct 2017 Genetics and precision medicine Milano Cornel.ppt
Designing Causal Inference Studies Using Real-World Data
Amia tbi-14-final
Thesis viva presentation reg. 24520011 (1).pptx
Pharmaceutical Comparative Effectiveness Research Abstract
Signal detection and their assessment in clinical trials
2016 11 17 aaps_337 denver vulto biosimilars interchangeability vs16k16agv
Dr. RM Pandey -Importance of Biostatistics in Biomedical Research.pptx
BioVariance - Pediatric Pharmacogenomics in Drug Discovery
Drug risk assessment 23 4-2010
Ad

More from Frank van Harmelen (20)

PPTX
Neuro-symbolic is not enough, we need neuro-*semantic*
PPTX
The K in "neuro-symbolic" stands for "knowledge"
PPTX
Adoption of Knowledge Graphs, mid 2022 (incomplete)
PPTX
Modular design patterns for systems that learn and reason: a boxology
PPTX
Adoption of Knowledge Graphs, late 2019
PPTX
Adoption of Knowledge Graphs, mid 2019
PPTX
Empirical Semantics
PPTX
The Empirical Turn in Knowledge Representation
PPTX
The end of the scientific paper as we know it (or not...)
PPTX
On the nature of AI, and the relation between symbolic and statistical approa...
PPTX
The end of the scientific paper as we know it (in 4 easy steps)
PPTX
The Web of Data: do we actually understand what we built?
PPTX
Semantic Web questions we couldn't ask 10 years ago
PPT
Knowledge Engineering rediscovered, Towards Reasoning Patterns for the Semant...
PPTX
Informatics is a natural science
PPTX
4 Popular Fallacies about the Semantic Web
PPT
PPT
Het slimme Web 3.0
PPT
OWL briefing
PPT
RDF briefing
Neuro-symbolic is not enough, we need neuro-*semantic*
The K in "neuro-symbolic" stands for "knowledge"
Adoption of Knowledge Graphs, mid 2022 (incomplete)
Modular design patterns for systems that learn and reason: a boxology
Adoption of Knowledge Graphs, late 2019
Adoption of Knowledge Graphs, mid 2019
Empirical Semantics
The Empirical Turn in Knowledge Representation
The end of the scientific paper as we know it (or not...)
On the nature of AI, and the relation between symbolic and statistical approa...
The end of the scientific paper as we know it (in 4 easy steps)
The Web of Data: do we actually understand what we built?
Semantic Web questions we couldn't ask 10 years ago
Knowledge Engineering rediscovered, Towards Reasoning Patterns for the Semant...
Informatics is a natural science
4 Popular Fallacies about the Semantic Web
Het slimme Web 3.0
OWL briefing
RDF briefing
Ad

Recently uploaded (20)

PDF
HPLC-PPT.docx high performance liquid chromatography
PDF
An interstellar mission to test astrophysical black holes
PPTX
neck nodes and dissection types and lymph nodes levels
PDF
AlphaEarth Foundations and the Satellite Embedding dataset
PDF
Formation of Supersonic Turbulence in the Primordial Star-forming Cloud
DOCX
Viruses (History, structure and composition, classification, Bacteriophage Re...
PDF
Biophysics 2.pdffffffffffffffffffffffffff
PDF
Unveiling a 36 billion solar mass black hole at the centre of the Cosmic Hors...
PDF
The scientific heritage No 166 (166) (2025)
PPTX
TOTAL hIP ARTHROPLASTY Presentation.pptx
PDF
Sciences of Europe No 170 (2025)
PPTX
BIOMOLECULES PPT........................
PPTX
The KM-GBF monitoring framework – status & key messages.pptx
PDF
bbec55_b34400a7914c42429908233dbd381773.pdf
PPTX
Classification Systems_TAXONOMY_SCIENCE8.pptx
PPTX
cpcsea ppt.pptxssssssssssssssjjdjdndndddd
PPTX
GEN. BIO 1 - CELL TYPES & CELL MODIFICATIONS
PPTX
DRUG THERAPY FOR SHOCK gjjjgfhhhhh.pptx.
PDF
CAPERS-LRD-z9:AGas-enshroudedLittleRedDotHostingaBroad-lineActive GalacticNuc...
PPTX
Protein & Amino Acid Structures Levels of protein structure (primary, seconda...
HPLC-PPT.docx high performance liquid chromatography
An interstellar mission to test astrophysical black holes
neck nodes and dissection types and lymph nodes levels
AlphaEarth Foundations and the Satellite Embedding dataset
Formation of Supersonic Turbulence in the Primordial Star-forming Cloud
Viruses (History, structure and composition, classification, Bacteriophage Re...
Biophysics 2.pdffffffffffffffffffffffffff
Unveiling a 36 billion solar mass black hole at the centre of the Cosmic Hors...
The scientific heritage No 166 (166) (2025)
TOTAL hIP ARTHROPLASTY Presentation.pptx
Sciences of Europe No 170 (2025)
BIOMOLECULES PPT........................
The KM-GBF monitoring framework – status & key messages.pptx
bbec55_b34400a7914c42429908233dbd381773.pdf
Classification Systems_TAXONOMY_SCIENCE8.pptx
cpcsea ppt.pptxssssssssssssssjjdjdndndddd
GEN. BIO 1 - CELL TYPES & CELL MODIFICATIONS
DRUG THERAPY FOR SHOCK gjjjgfhhhhh.pptx.
CAPERS-LRD-z9:AGas-enshroudedLittleRedDotHostingaBroad-lineActive GalacticNuc...
Protein & Amino Acid Structures Levels of protein structure (primary, seconda...

Linked Open Data for Medical Guidelines Interactions

Editor's Notes

  • #8: Should administer NSAID to reduce blood coagulation
  • #10: guideline Diabetes (DB) should administer Tramadol to reduce blood coagulation should administer Insulin to reduce blood sugar level
  • #11: guideline Osteoarthritis (OA) should NOT administer Aspirin to avoid increasing risk of gastro intestinal bleeding Notice: DB.1 and DB.2 are alternative recommendations meant for promoting the same effect. Interactions: DB1 en DB2 alternatives
  • #12: Osteoarthritis (OA): should administer Ibuprofen to reduce pain
  • #13: DB1 and OA1 are contradictory recommendations DB1 might lead to the prescription of Aspirin Aspirin is not recommended by OA1.
  • #14: third guideline: Hypertension Should administer Thiziade to reduce the blood pressure OA3 and HT1 interact: OA3 has interaction via high blood sugar levels.
  • #38: dotted lines: beliefs
  • #39: Alternative drug is Ibuprofen.
  • #49: Norm —> until now only mentioned recommendation