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Managing Your References
Sara Abudahab
Department of Clinical Pharmacy
University of Jordan
2nd of August 2018
• How well will you
remember each of them?
• How do you plan to store
the paper?
• How do you plan to store
your notes?
• How are you going to
find/search these later?
You’re going to read
“a few papers” soon
Hard-copy vs. Soft-copy
Reading hard copies
then writing the
references manually
Hard Copies
Reading papers online
and sending the
references to your
reference manager
Soft Copies
Citation Management Tools
make it easy!
There are many choices:
Aigaion, Bebop, BibDesk, Biblioscape,
BibSonomy, Bibus, Bookends, Citavi,
CiteULike, Connotea, EndNote, JabRef,
Jumper 2.0, KBibTeX, Mendeley, Papers,
PDF Stacks, Pybliographer, Qiqqa, refbase,
RefDB, Reference Manager, Referencer,
RefWorks, Scholar's Aid, Sente, Wikindx,
WizFolio, Zotero
a personal note
Clippings Word Document
Read a lot
about your
topic!
1
Summarize!
2
Rephrase!
3
Referencing!
4
Organization
Today I will cover
Mendelely and Endnote
Reading papers online and
sending the references to your
reference manager
• What is Mendeley?
• How to use it for citations?
• How to add citations using Mendeley?
-Exporting references automatically
-Adding references manually
Getting Started with Mendeley
• Organizes articles and citations you have
collected into a “Library”
• Saves your notes and annotations with each
article
• Formats citations and bibliographies when you
write your paper
What is Mendeley?
Linda Wobbe, Saint Mary‘s College Library
Create an Account
• Navigate to Mendeley.com and create a personal account
• You need both: Desktop Version and Web Version
• It is supported by Windows, Mac, etc.
Linda Wobbe, Saint Mary‘s College Library
Download the Desktop Version
Install: Web Importer and Word Plugin
Now you are ready to add articles!
Video
You can add citation files using many websites:
NCBI (as seen in the video)
Google Scholar
Research-gate
Other online journals (look for: CITATION, DOWNLOAD CITATION,
EXPORT CITATION, REFERENCING, ETC.)
If it’s a book look for it in Google-books or accesspharmacy 
Downloading citation from the journal itself
Downloading Citation using Google Scholar
Step1:
Open google scholar website
Downloading Citation using Google Scholar
Step2:
Search for the subject of your interest
Downloading Citation using Google Scholar
Step3:
Click on the citation icon of the article of interest
Downloading Citation using Google Scholar
Using Google books
Using Google books
Using Google books
What if I don’t find my citation file?
• Many books and articles that you will
read are very old and haven’t been
linked with automatic citations
• Sometimes you need to reference
unpublished data, websites links, etc.
• You can add these references
manually easily
What if I don’t find the citation file that I
want?
• Add references manually, it’s very easy.
https://subjectguides.library.american.edu/c.php?g=175216&p=1155099
What if I don’t find my citation file?
https://subjectguides.library.american.edu/c.php?g=175216&p=1155099
Getting Started with Endnote
• Create a database “library” of references for a
specific topic
• Download references from library catalogs or
other electronic databases
• Link references into word processed documents
• Generate bibliographies in specific styles,
especially for publication
Installing Endnote
Installing Endnote
Exporting references to Endnote
https://www.youtube.com/watch?v=S3xo6ZjBV6U
Exporting references to Endnote
https://www.youtube.com/watch?v=S3xo6ZjBV6U
Exporting references to Endnote
https://www.youtube.com/watch?v=S3xo6ZjBV6U
Using Endnote in Word Document
https://www.youtube.com/watch?v=S3xo6ZjBV6U
Exporting references from Endnote
https://www.youtube.com/watch?v=S3xo6ZjBV6U
Exporting references from Endnote
https://www.youtube.com/watch?v=S3xo6ZjBV6U
Changing the style
https://www.youtube.com/watch?v=S3xo6ZjBV6U
Changing the style
https://www.youtube.com/watch?v=S3xo6ZjBV6U
Changing the style
You can also create and add your own style
Jordan University’s style with the specific required edits is added
with the PowerPoint file 
MendeleyEndNote
Available wherever you have
web access and on computers
with Mendeley Desktop
installed, which can be
synched with Mendeley web
account.
Available only on computers that
have the EndNote desktop program
installed and that have access to
your EndNote reference library. Also
available: EndNote Online, which can
be synched with only one library at a
time.
Access
No, but can look up a known
item by DOI, PMID or ArXiv
ID.
Yes. Search free resources such
as PubMed plus
many HSLS subscription resources
directly from within EndNote.
Finding and working
with references
Yes. Download <=
200 citations using Mendeley
Web importer.
Yes. Download <= 200 citations using
PubMed's Citation Manager option.
Download references
easily from PubMed
search
Yes, using the MS Word
Plugin, which can be installed
from the Mendeley Desktop
program.
Yes, using Cite While You Write feature
in Word. This is included in the
default EndNote installation
configuration.
Formatting
MendeleyEndNote
Yes (using CSL Editor), but more
challenging than EndNote.
YesEdit existing citation
styles or create your own
Yes,using Mendeley groups featu
re you can create either a public
or private group.
Yes. You can sync and share one
library with other EndNote users
or compressed libraries can be
shared.
Sharing
Yes. The catalog
includes "related research" links.
NoIncludes research
discovery tools
Yes. When you sign up for
a Mendeley account, a researcher
profile is automatically created
which can then be followed by
other researchers. Public groups
also allow for crowd sourced
contributions/ discussion on a
topic.
NoIncludes social
networking features
http://hsls.libguides.com/citation-manager/comparison
Which one is easier to use?
Only
use
whatever
you
are
comfortable
with!
Extra notes
For JU
Students
Mendeley usually add the names of three authors, University of
Jordan guidelines of writing states to mention only up to two
authors, and if there’s more authors to use “et al” instead.
Fore more information refer to
‫دليل‬‫العليا‬ ‫الدراسات‬ ‫لطلبة‬ ‫الجامعية‬ ‫الرسائل‬ ‫كتابة‬
Extra notes For JU Students
Extra notes For JU Students
All of reference's information must be in the same format
except for the journal name and the DOI (if present) they
must be in bold.
For more information
• Youtube is full of tutorial videos!
(Mendeley and Endnote have their
own Youtube channels)
• I would love to help as well 

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Managing references

  • 1. Managing Your References Sara Abudahab Department of Clinical Pharmacy University of Jordan 2nd of August 2018
  • 2. • How well will you remember each of them? • How do you plan to store the paper? • How do you plan to store your notes? • How are you going to find/search these later? You’re going to read “a few papers” soon
  • 3. Hard-copy vs. Soft-copy Reading hard copies then writing the references manually Hard Copies Reading papers online and sending the references to your reference manager Soft Copies
  • 4. Citation Management Tools make it easy! There are many choices: Aigaion, Bebop, BibDesk, Biblioscape, BibSonomy, Bibus, Bookends, Citavi, CiteULike, Connotea, EndNote, JabRef, Jumper 2.0, KBibTeX, Mendeley, Papers, PDF Stacks, Pybliographer, Qiqqa, refbase, RefDB, Reference Manager, Referencer, RefWorks, Scholar's Aid, Sente, Wikindx, WizFolio, Zotero
  • 7. Read a lot about your topic! 1 Summarize! 2 Rephrase! 3 Referencing! 4 Organization
  • 8. Today I will cover Mendelely and Endnote Reading papers online and sending the references to your reference manager
  • 9. • What is Mendeley? • How to use it for citations? • How to add citations using Mendeley? -Exporting references automatically -Adding references manually
  • 10. Getting Started with Mendeley • Organizes articles and citations you have collected into a “Library” • Saves your notes and annotations with each article • Formats citations and bibliographies when you write your paper What is Mendeley? Linda Wobbe, Saint Mary‘s College Library
  • 11. Create an Account • Navigate to Mendeley.com and create a personal account • You need both: Desktop Version and Web Version • It is supported by Windows, Mac, etc. Linda Wobbe, Saint Mary‘s College Library
  • 13. Install: Web Importer and Word Plugin
  • 14. Now you are ready to add articles! Video You can add citation files using many websites: NCBI (as seen in the video) Google Scholar Research-gate Other online journals (look for: CITATION, DOWNLOAD CITATION, EXPORT CITATION, REFERENCING, ETC.) If it’s a book look for it in Google-books or accesspharmacy 
  • 15. Downloading citation from the journal itself
  • 16. Downloading Citation using Google Scholar Step1: Open google scholar website
  • 17. Downloading Citation using Google Scholar Step2: Search for the subject of your interest
  • 18. Downloading Citation using Google Scholar Step3: Click on the citation icon of the article of interest
  • 19. Downloading Citation using Google Scholar
  • 23. What if I don’t find my citation file? • Many books and articles that you will read are very old and haven’t been linked with automatic citations • Sometimes you need to reference unpublished data, websites links, etc. • You can add these references manually easily
  • 24. What if I don’t find the citation file that I want? • Add references manually, it’s very easy. https://subjectguides.library.american.edu/c.php?g=175216&p=1155099
  • 25. What if I don’t find my citation file? https://subjectguides.library.american.edu/c.php?g=175216&p=1155099
  • 26. Getting Started with Endnote • Create a database “library” of references for a specific topic • Download references from library catalogs or other electronic databases • Link references into word processed documents • Generate bibliographies in specific styles, especially for publication
  • 29. Exporting references to Endnote https://www.youtube.com/watch?v=S3xo6ZjBV6U
  • 30. Exporting references to Endnote https://www.youtube.com/watch?v=S3xo6ZjBV6U
  • 31. Exporting references to Endnote https://www.youtube.com/watch?v=S3xo6ZjBV6U
  • 32. Using Endnote in Word Document https://www.youtube.com/watch?v=S3xo6ZjBV6U
  • 33. Exporting references from Endnote https://www.youtube.com/watch?v=S3xo6ZjBV6U
  • 34. Exporting references from Endnote https://www.youtube.com/watch?v=S3xo6ZjBV6U
  • 37. Changing the style You can also create and add your own style Jordan University’s style with the specific required edits is added with the PowerPoint file 
  • 38. MendeleyEndNote Available wherever you have web access and on computers with Mendeley Desktop installed, which can be synched with Mendeley web account. Available only on computers that have the EndNote desktop program installed and that have access to your EndNote reference library. Also available: EndNote Online, which can be synched with only one library at a time. Access No, but can look up a known item by DOI, PMID or ArXiv ID. Yes. Search free resources such as PubMed plus many HSLS subscription resources directly from within EndNote. Finding and working with references Yes. Download <= 200 citations using Mendeley Web importer. Yes. Download <= 200 citations using PubMed's Citation Manager option. Download references easily from PubMed search Yes, using the MS Word Plugin, which can be installed from the Mendeley Desktop program. Yes, using Cite While You Write feature in Word. This is included in the default EndNote installation configuration. Formatting
  • 39. MendeleyEndNote Yes (using CSL Editor), but more challenging than EndNote. YesEdit existing citation styles or create your own Yes,using Mendeley groups featu re you can create either a public or private group. Yes. You can sync and share one library with other EndNote users or compressed libraries can be shared. Sharing Yes. The catalog includes "related research" links. NoIncludes research discovery tools Yes. When you sign up for a Mendeley account, a researcher profile is automatically created which can then be followed by other researchers. Public groups also allow for crowd sourced contributions/ discussion on a topic. NoIncludes social networking features http://hsls.libguides.com/citation-manager/comparison
  • 40. Which one is easier to use? Only use whatever you are comfortable with!
  • 42. Mendeley usually add the names of three authors, University of Jordan guidelines of writing states to mention only up to two authors, and if there’s more authors to use “et al” instead. Fore more information refer to ‫دليل‬‫العليا‬ ‫الدراسات‬ ‫لطلبة‬ ‫الجامعية‬ ‫الرسائل‬ ‫كتابة‬ Extra notes For JU Students
  • 43. Extra notes For JU Students All of reference's information must be in the same format except for the journal name and the DOI (if present) they must be in bold.
  • 44. For more information • Youtube is full of tutorial videos! (Mendeley and Endnote have their own Youtube channels) • I would love to help as well 